Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04947 and RBAM_030340

See DNA alignment / Visit BSNT_04947 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_04947___yvrG.1.9828.seq
#    -bsequence pep-align/RBAM_030340___yvrG1.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04947___yvrG-RBAM_030340___yvrG1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04947___yvrG-RBAM_030340___yvrG1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04947___yvrG
# 2: RBAM_030340___yvrG1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     420/580 (72.4%)
# Similarity:   498/580 (85.9%)
# Gaps:           0/580 ( 0.0%)
# Score: 2274.0
# 
#
#=======================================

BSNT_04947___      1 MRLRWKFLFHFFGQMLIVILLLTVMLVASFFYLDARFSDAESNSGLTKAT     50
                     ||:|.|||.|||||:|:||||::|:.||||||||.|||:||:|:||||||
RBAM_030340__      1 MRMRGKFLLHFFGQLLLVILLMSVLAVASFFYLDWRFSEAEANAGLTKAT     50

BSNT_04947___     51 TDTLEAYLDVNEDGTWEVDNFLKKSVDKQHGWMQIIDSEGNTDYSYGVPK    100
                     .|:.||:||.||||||:||.|||.||.||.||:|||:....|||:|.|||
RBAM_030340__     51 ADSFEAWLDKNEDGTWDVDEFLKMSVRKQKGWLQIINDNEKTDYAYRVPK    100

BSNT_04947___    101 DVPGTYTKKELLSIYKTKKLHNYKLNYWAINIEDKSYLLLSGWKSKSEQL    150
                     |||..|::|:|||||:.:...|||||||.:.|.|::||:|.||||.||||
RBAM_030340__    101 DVPSHYSRKDLLSIYQYRNFDNYKLNYWTVTINDETYLILFGWKSASEQL    150

BSNT_04947___    151 LTSVEKREQKIDSLAHYKSSTIDYIKRKKGAIYLLDSNGKILDSINSTKS    200
                     ||.:|.:|..:.||:.||.||||||||:|||:|||:.:|::|..|||||.
RBAM_030340__    151 LTYIESQEPSLASLSQYKKSTIDYIKREKGAVYLLEDSGRLLGDINSTKK    200

BSNT_04947___    201 ERKTMNQLELLKYSSKPWNYKREISVKILNKDRWMVATVPNPVYVTDQEF    250
                     ||.|:|:||||||||||||||||||.|.|:|.:||||:||||||:.|.||
RBAM_030340__    201 ERNTVNELELLKYSSKPWNYKREISFKRLDKTKWMVASVPNPVYIPDHEF    250

BSNT_04947___    251 NKSFLKVVLKAMFLVMAVLFMYIIWMTVWYMFRFGLPIFHTIRWLVNLSK    300
                     |||||:.|:|.:||::.:|...|..:|:||.||||.|:||||:|||||||
RBAM_030340__    251 NKSFLRNVMKTLFLLIGILVFMICILTIWYSFRFGWPLFHTIKWLVNLSK    300

BSNT_04947___    301 GKLEEPRNRDGRPVSKNKKGKIKQPYRFFGEIFESMDQLTETLRRDKRNR    350
                     |:||||:||.|:|||||||||.|||:|||.||||||||||:||:|||:||
RBAM_030340__    301 GRLEEPKNRKGQPVSKNKKGKTKQPFRFFAEIFESMDQLTDTLKRDKKNR    350

BSNT_04947___    351 EKIQATREEWIAGLSHDLKTPLSSIYGYSMMLESKQYDWSPEEVKEMGQV    400
                     |||||||||||||||||||||||:|||||||||||||||:|||||||||:
RBAM_030340__    351 EKIQATREEWIAGLSHDLKTPLSTIYGYSMMLESKQYDWTPEEVKEMGQI    400

BSNT_04947___    401 VREKSEYMSKLIEDLNLTYRLKNDALPIERNLTSLIPFFKNVIEDFKKNP    450
                     |||||||||||||||||||||||.||||||.|.:::||.:||..||.||.
RBAM_030340__    401 VREKSEYMSKLIEDLNLTYRLKNAALPIERRLINVVPFIRNVTNDFTKNT    450

BSNT_04947___    451 FSEGYDISFVSKEEHIEFALDEAWFRRILENLLGNAVKHNGKGTEIQVIL    500
                     |||||||:|.:|:|.|.||:|||||||||||||.||||||.|||.|:|:|
RBAM_030340__    451 FSEGYDIAFETKKEDILFAIDEAWFRRILENLLANAVKHNKKGTAIRVVL    500

BSNT_04947___    501 EQTKNHISLKVKDNGKGMDEETITHLFNRYYRGTNTKDSTAGTGLGLAIA    550
                     |::...:.|||||||:|||:|||..||||||||||||..:.|||||||||
RBAM_030340__    501 EESAEQLILKVKDNGRGMDDETIHQLFNRYYRGTNTKGPSEGTGLGLAIA    550

BSNT_04947___    551 KELVHLHNGTIHVNSRMNIGTVITILFKKQ    580
                     ||||||||||||||||::.||||||||||.
RBAM_030340__    551 KELVHLHNGTIHVNSRISAGTVITILFKKD    580


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04947 and RBAM_030340

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
