Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04996 and RBAM_030660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence pep-align/BSNT_04996___bdbD.1.9828.seq
# -bsequence pep-align/RBAM_030660___bdbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04996___bdbD-RBAM_030660___bdbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04996___bdbD-RBAM_030660___bdbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04996___bdbD
# 2: RBAM_030660___bdbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 171/224 (76.3%)
# Similarity: 194/224 (86.6%)
# Gaps: 3/224 ( 1.3%)
# Score: 895.0
#
#
#=======================================
BSNT_04996___ 1 MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQP 50
.||:|||||||||||::||||.||||||||:||:..:.|:.||||||||
RBAM_030660__ 1 -MKKKQSSAKFAVILTLIVVVLFAAIVIINNQTEKAGETVAEQPSIKGQP 49
BSNT_04996___ 51 VLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 100
|||||.|||||||||||||||||||||||||||:||||||||||||||||
RBAM_030660__ 50 VLGKDSAPVTVVEFGDYKCPSCKVFNSDIFPKIKKDFIDKGDVKFSFVNV 99
BSNT_04996___ 101 MFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLG 150
|:||.|||||||||||||||||.|||.|||||||:||.:|||||||.||.
RBAM_030660__ 100 MYHGSGSRLAALASEEVWKEDPASFWAFHEKLFEQQPSSEQEWVTPALLE 149
BSNT_04996___ 151 DLAKSTT-KIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVND 199
...|||. |:.|:.|||||||||||.:::.|:|||.|:||.|||||||||
RBAM_030660__ 150 KTVKSTAKKVDPDKLKENLDKETFAKELKADTDLNDKLNITATPTIYVND 199
BSNT_04996___ 200 KVIKNFADYDEIKETIEKELKGK- 222
|||.:|:.||||.:||:||||.:
RBAM_030660__ 200 KVINDFSKYDEISKTIKKELKNEK 223
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