Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05089 and RBAM_030890

See DNA alignment / Visit BSNT_05089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05089___smpB.1.9828.seq
#    -bsequence pep-align/RBAM_030890___smpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05089___smpB-RBAM_030890___smpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05089___smpB-RBAM_030890___smpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05089___smpB
# 2: RBAM_030890___smpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     151/156 (96.8%)
# Similarity:   154/156 (98.7%)
# Gaps:           0/156 ( 0.0%)
# Score: 792.0
# 
#
#=======================================

BSNT_05089___      1 MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNLKDSF     50
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_030890__      1 MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNMKDSF     50

BSNT_05089___     51 AKIERGEVFLHNMHVSPYEQGNRYNHDPLRTRKLLMHRKEINKLIGLTKE    100
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
RBAM_030890__     51 AKIERGEVFLHNMHISPYEQGNRYNHDPLRTRKLLMHRKEINKLIGLTKE    100

BSNT_05089___    101 KGYSLVPLKLYLKNGFAKVLLGLGKGKKNYDKREDLKRKDAKREIERAFR    150
                     ||||||||||||||||||||:|||||||.|||||||||||||||||||||
RBAM_030890__    101 KGYSLVPLKLYLKNGFAKVLIGLGKGKKTYDKREDLKRKDAKREIERAFR    150

BSNT_05089___    151 DSQKGF    156
                     |.||||
RBAM_030890__    151 DRQKGF    156


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