Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05107 and RBAM_031020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:35
# Commandline: needle
# -asequence pep-align/BSNT_05107___opuBD.1.9828.seq
# -bsequence pep-align/RBAM_031020___opuBD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05107___opuBD-RBAM_031020___opuBD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05107___opuBD-RBAM_031020___opuBD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05107___opuBD
# 2: RBAM_031020___opuBD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 184/226 (81.4%)
# Similarity: 205/226 (90.7%)
# Gaps: 1/226 ( 0.4%)
# Score: 900.0
#
#
#=======================================
BSNT_05107___ 1 MNVLEQLMTYYAQNGSYVMDEFGRHFLMSAYGVLCAAVVGVPAGILIAHF 50
|:.:::|.||||||||||:.|..||||||||||:.|||..:||||:.|..
RBAM_031020__ 1 MDTMKELFTYYAQNGSYVLYECWRHFLMSAYGVVFAAVFAIPAGIVTARH 50
BSNT_05107___ 51 RRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANTVILSLFLYSLLPII 100
.||:.|||||.|||||:|||||||||||||||||||||.:|||||||||:
RBAM_031020__ 51 GRLAGWVFAVANVIQTVPALAMLAVLMLVMGLGANTVITALFLYSLLPIL 100
BSNT_05107___ 101 RNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGLRTALV 150
|||:||||:||||||||||||||||:|:||||||||||||||||||||||
RBAM_031020__ 101 RNTHTGIINIEHAYLESGKAMGMTKYQILRMVELPLALSVIMAGLRTALV 150
BSNT_05107___ 151 IAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAGAIPTAVMAVGADL 200
||||||||||||||||||||||||||||||||||||||||||:|||.|||
RBAM_031020__ 151 IAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAGAIPTALMAVAADL 200
BSNT_05107___ 201 LMAWLERALSPVKKKRTGAKHVQSAA 226
||||||||||||||::. ...|:||:
RBAM_031020__ 201 LMAWLERALSPVKKQKR-KLIVRSAS 225
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