Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05143 and RBAM_031370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence pep-align/BSNT_05143___yvbW.1.9828.seq
# -bsequence pep-align/RBAM_031370___yvbW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05143___yvbW-RBAM_031370___yvbW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05143___yvbW-RBAM_031370___yvbW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05143___yvbW
# 2: RBAM_031370___yvbW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 192/451 (42.6%)
# Similarity: 220/451 (48.8%)
# Gaps: 192/451 (42.6%)
# Score: 965.0
#
#
#=======================================
BSNT_05143___ 1 MKNDNQTLKRTMTSRHIMMMALGGAIGAGLFKGSSSAIDVAGPSVIIAYL 50
|:.|.|||||||:||||||||||||||||||||||:|||.|||||::|||
RBAM_031370__ 1 MEKDKQTLKRTMSSRHIMMMALGGAIGAGLFKGSSTAIDEAGPSVLLAYL 50
BSNT_05143___ 51 LGGIILLFIMQGLAEMAVRNRNARTFRDLVQQVLGNYAAYFLDWIYWKMW 100
||||||||||||||||||||::||||||||||.||:||||||||||||||
RBAM_031370__ 51 LGGIILLFIMQGLAEMAVRNKHARTFRDLVQQSLGSYAAYFLDWIYWKMW 100
BSNT_05143___ 101 VLNIAAEAVVAAIFIQYWLPGCPIWVLALGISLIVTIVNLLSVKIFAETE 150
||||||||||||||||||||.||||:|||.||::||:||:||||:|||||
RBAM_031370__ 101 VLNIAAEAVVAAIFIQYWLPECPIWILALIISIVVTVVNMLSVKLFAETE 150
BSNT_05143___ 151 YWLAMIKITVIIIFIILGLLLLFVSFGDHTASGFSNLTDHGGFFPHGGTG 200
||||:||||||:|||:.|:||||.|||:|||.|.|:|||||||||||..|
RBAM_031370__ 151 YWLALIKITVIVIFILCGILLLFFSFGNHTAPGLSHLTDHGGFFPHGAGG 200
BSNT_05143___ 201 LITAMLVVIYSYGGTEIIGVTLAETKNPEK----VVPKAVRSTLTRIVAF 246
:||||||||||||||..........|.|.| ..||.|.:...
RBAM_031370__ 201 VITAMLVVIYSYGGTGNHRRHAGGDKKPRKGDPESCPKHVNADCR----- 245
BSNT_05143___ 247 YLLPFFIIVSLIPWNQVNSVPESPFVMVFKMVGIPGADHIMNAVILLAII 296
|::.::....|.:|:..|
RBAM_031370__ 246 -----FLLAAVFHHRQPDSLESS--------------------------- 263
BSNT_05143___ 297 SSMNSGLYGSSRILYTQASDGRLPKVFSKLSSKNVPMFAILMCTSSLYIG 346
RBAM_031370__ 263 -------------------------------------------------- 263
BSNT_05143___ 347 VLISLFAGSQTFNYLMGSLGYTVLFIWLIIGFAHLKSRKQQTETPAYYVK 396
RBAM_031370__ 263 -------------------------------------------------- 263
BSNT_05143___ 397 WFPYTTWFAIVALLAILIGVIMTTSIVITGITAAIYLLITVAYLVKGRKH 446
RBAM_031370__ 263 -------------------------------------------------- 263
BSNT_05143___ 447 Q 447
RBAM_031370__ 263 - 263
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