Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05170 and RBAM_031510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05170___sigL.1.9828.seq
# -bsequence pep-align/RBAM_031510___sigL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05170___sigL-RBAM_031510___sigL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05170___sigL-RBAM_031510___sigL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05170___sigL
# 2: RBAM_031510___sigL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 320/437 (73.2%)
# Similarity: 369/437 (84.4%)
# Gaps: 0/437 ( 0.0%)
# Score: 1638.0
#
#
#=======================================
BSNT_05170___ 1 MMDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIER 50
|||:||||.|:|||||||||:||||||||:|||||.||||||||||||||
RBAM_031510__ 1 MMDIKLQQTQMLKPQLTQELKQAITLLGYNSAELAGYIDELSLENPLIER 50
BSNT_05170___ 51 KETDTPPLSYHKTNKNRMNAQEAGLQLSNPQKTLQDALKQQSLDMNLTNT 100
||||||||||||||||||..::...|:...:|||||:||||:|||.|::.
RBAM_031510__ 51 KETDTPPLSYHKTNKNRMKERDGSQQIRLTRKTLQDSLKQQALDMKLSDD 100
BSNT_05170___ 101 EKKIFNYLIHSLDSNGYLEEDVEEAARRLSVSAKETEAVLAKLQSLEPAG 150
||||||||||||||||||:||:..||..:|.|.:||||||.|||||||||
RBAM_031510__ 101 EKKIFNYLIHSLDSNGYLKEDIPAAADHVSASQEETEAVLKKLQSLEPAG 150
BSNT_05170___ 151 IGARSLQECILLQLQRLPNRNEQAEMLVSAHFDAFAQKKWKALSVETGIP 200
||||||||||||||:|||.||||||.:..|:|:.||:|.||||:::||||
RBAM_031510__ 151 IGARSLQECILLQLRRLPERNEQAEWIADAYFELFARKNWKALTLKTGIP 200
BSNT_05170___ 201 LHTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKNGHIAAELNT 250
|..||||:|.|:||.|||||.:|..|...|:|||||||||||.|.|.||:
RBAM_031510__ 201 LKDIQDIADMISALDPRPGLRYAHEEPGFYVEPDIFITVKNGIIQARLNS 250
BSNT_05170___ 251 RSFPEIDLHPQYRTLLSSGSCQDTVSYLSAKYQEWRWLSRALRQRKQTIT 300
||||:|.||..|:.|||:..|:||.:||||||||||||:|||.|||||||
RBAM_031510__ 251 RSFPDIQLHTHYQPLLSAAGCRDTKNYLSAKYQEWRWLNRALSQRKQTIT 300
BSNT_05170___ 301 RIINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRAIKGKTIQ 350
|||..|..||:.|||.|:|.|:||||||||:.|.|||||:|||||||.:|
RBAM_031510__ 301 RIIGVLTERQESFFLTGKSGMQPLTLREVAETLELHESTISRAIKGKYVQ 350
BSNT_05170___ 351 TPYGLFEMKLFFSAKAEASGDGDASNYAVKTHLENLINQEDKTKPLSDQK 400
|||||:|||.|||||||:||||.|||||||.|||.|:.:|||.||.||||
RBAM_031510__ 351 TPYGLYEMKTFFSAKAESSGDGGASNYAVKAHLEALVGKEDKKKPFSDQK 400
BSNT_05170___ 401 LVDLLYEQHGIQISRRTVAKYRDQMNIPSSAARKRYK 437
|.|||.||:.|:||||||||||||:|||.|:|||||.
RBAM_031510__ 401 LADLLDEQYDIRISRRTVAKYRDQLNIPPSSARKRYS 437
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