Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05176 and RBAM_031550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05176___yvfD.1.9828.seq
# -bsequence pep-align/RBAM_031550___epsM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05176___yvfD-RBAM_031550___epsM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05176___yvfD-RBAM_031550___epsM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05176___yvfD
# 2: RBAM_031550___epsM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 133/216 (61.6%)
# Similarity: 160/216 (74.1%)
# Gaps: 1/216 ( 0.5%)
# Score: 687.0
#
#
#=======================================
BSNT_05176___ 1 MKNVAIVGDGGHGKVIRELINARSDTRLAAVLDDKFKTFEGGKEWYTGPP 50
||.|.::|:||||||::|:::||||..||.||||.|..|......|||..
RBAM_031550__ 1 MKKVVLIGNGGHGKVVKEIVHARSDMELAGVLDDGFSGFAVRNGLYTGRT 50
BSNT_05176___ 51 EAVTELRRLIPDVLFLIAVGNNSVRKQLAERLGLRKDDFITLIHPSAIVS 100
:.|..||:|:|:.:|.|.:|.|.|||||||.|||..||:..||||.||||
RBAM_031550__ 51 KDVPMLRKLVPEAVFTICIGRNGVRKQLAETLGLEDDDYAALIHPGAIVS 100
BSNT_05176___ 101 RSAVIGEGTVIMAGAIIQADARIGAHCIINTGAVAEHDNQISDYVHLSPR 150
.:|.:|.|||:||||:|||.|.|||||||||||||:|||.|.||||||||
RBAM_031550__ 101 ETASVGHGTVVMAGAVIQAGADIGAHCIINTGAVADHDNAIGDYVHLSPR 150
BSNT_05176___ 151 VTLSGAVSVQEGAHVGTGASVIPQITIGAWSIVGAGSAVIRPIPDRVTAA 200
..|:|.|.|.||.|:|.||||||||.||.||::|||:|||..||..|||.
RBAM_031550__ 151 AALAGGVKVGEGTHIGIGASVIPQIDIGPWSVIGAGAAVISRIPGHVTAV 200
BSNT_05176___ 201 GAPARIISSIQTSNKG 216
|.|||:||.|. :.||
RBAM_031550__ 201 GVPARVISPIH-NEKG 215
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