Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05375 and RBAM_032490

See DNA alignment / Visit BSNT_05375 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05375___fliS.1.9828.seq
#    -bsequence pep-align/RBAM_032490___fliS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05375___fliS-RBAM_032490___fliS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05375___fliS-RBAM_032490___fliS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05375___fliS
# 2: RBAM_032490___fliS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      84/133 (63.2%)
# Similarity:   108/133 (81.2%)
# Gaps:           0/133 ( 0.0%)
# Score: 452.0
# 
#
#=======================================

BSNT_05375___      1 MAIQNPYTAYQQNSVNTATPGELTLMLYNGCLKFIRLASQAIENDDMERK     50
                     |||.||:.||||.||.||.|.|||||||||||:||:||.||::.:::|.|
RBAM_032490__      1 MAINNPFAAYQQTSVFTAAPEELTLMLYNGCLRFIKLARQAMKQNNLEAK     50

BSNT_05375___     51 NENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRLVQANIKNDTGM    100
                     |||::|||||||||:.||||.||:|..|.::|||:.|||:.||::|:...
RBAM_032490__     51 NENIVKAQNIIQELSITLNREIEISEQMSSIYDYIRRRLIDANVQNNGEF    100

BSNT_05375___    101 LAEVEGYVTDFRDAWKQAIQSERKDRHGSGGIA    133
                     |.|.|..||:|||.||||:|||||:.||:||:|
RBAM_032490__    101 LDEAEKLVTEFRDTWKQAMQSERKNSHGAGGLA    133


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