Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05429 and RBAM_032790

See DNA alignment / Visit BSNT_05429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05429.1.9828.seq
#    -bsequence pep-align/RBAM_032790___lytA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05429-RBAM_032790___lytA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05429-RBAM_032790___lytA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05429
# 2: RBAM_032790___lytA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      38/122 (31.1%)
# Similarity:    60/122 (49.2%)
# Gaps:          21/122 (17.2%)
# Score: 162.5
# 
#
#=======================================

BSNT_05429         1 MEFVDKKGEVKKMKKLIVLTLSMLL---LLSACGTSGQSEDKLSSGNKNA     47
                                 |||.|..:..:||   :|:||||:.||: |.|..::|.
RBAM_032790__      1 ------------MKKTIAASFLILLFSVVLAACGTADQSK-KGSGSSENQ     37

BSNT_05429        48 ASEETITKEGSFAGLADSHTIAVNIDGKETTLQIDEDLQEKVNSIEEGKK     97
                     |.:||    ..:.|:||:|||.|.:|.:..:.:..:|..:.:|...|..|
RBAM_032790__     38 AQKET----AYYVGMADTHTIEVKVDDQPVSFEFSDDFSDVLNKFSENDK     83

BSNT_05429        98 VEVQYTKVENGVLELKSIEIK-    118
                     |.:.|...:.|..|:|.||.. 
RBAM_032790__     84 VSITYFTNDKGQKEIKEIEKAK    105


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