Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05437 and RBAM_032810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence pep-align/BSNT_05437.1.9828.seq
# -bsequence pep-align/RBAM_032810___mnaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05437-RBAM_032810___mnaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05437-RBAM_032810___mnaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: RBAM_032810___mnaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 226/387 (58.4%)
# Similarity: 265/387 (68.5%)
# Gaps: 67/387 (17.3%)
# Score: 1130.0
#
#
#=======================================
BSNT_05437 1 MKKLKVMTVFGTRPEAIKMAPLVLELRKYPQIESYVTVTAQHRQMLDQVL 50
||||||||||||||||||||||||||.||.:|:|.|||||||||||||||
RBAM_032810__ 1 MKKLKVMTVFGTRPEAIKMAPLVLELEKYQEIDSLVTVTAQHRQMLDQVL 50
BSNT_05437 51 EAFDLKPDFDLNIMKERQTLAEITSNALMKLDELFQSIKPDIVLVHGDTT 100
|||.:.||||||||||||||:||||:||:|||:|||.:||||||||||||
RBAM_032810__ 51 EAFSITPDFDLNIMKERQTLSEITSHALLKLDKLFQEVKPDIVLVHGDTT 100
BSNT_05437 101 TTFAGSLAAYYHQISVGHVEAGLRTGNKYSPFPEELNRLLTGSIADFHFA 150
|||||||||:||||::|||||||||.|||||||||:||.:||.:||.:||
RBAM_032810__ 101 TTFAGSLAAFYHQIAIGHVEAGLRTHNKYSPFPEEINRQMTGVMADVNFA 150
BSNT_05437 151 PTEQAEKNLLHENKDPETIFVTGNTAIDALRTTVRDGYAHPVLEKIGSDK 200
||.|||:|||.|||.|::||||||||||||:||||:.|.||:.:|:...:
RBAM_032810__ 151 PTSQAEQNLLSENKKPDSIFVTGNTAIDALQTTVREDYFHPIFDKLEGSR 200
BSNT_05437 201 MILLTAHRRENLGKPMENMFKAIRRIVEEFDGVQVVYPVHLNPAVREAAA 250
|||||||||||||:|||.||||:||:||||:.|||||||||||||||||.
RBAM_032810__ 201 MILLTAHRRENLGRPMEQMFKAVRRVVEEFEDVQVVYPVHLNPAVREAAE 250
BSNT_05437 251 KHFGDLDKVHLLEPLEVIDFTTSLLK----LTSSSPTRVGCRKKRRRLES 296
.||.|.|:|||:|||||:||.....| ||.|... :....|
RBAM_032810__ 251 AHFADSDRVHLIEPLEVVDFHNFAAKANFILTDSGGV-------QEEAPS 293
BSNT_05437 297 RSSCFAILRN------GQKAFGPVRLNWQERMKIRSIN------------ 328
......:||: |.|| |.::|...:...:..:.
RBAM_032810__ 294 LGKPVLVLRDTTERPEGVKA-GTLKLAGTDEETVYQLTKQLLTDQAEYER 342
BSNT_05437 328 ------------------------------------- 328
RBAM_032810__ 343 MSKASNPYGDGSASKRIVEELLYRYGYRKTRPQPFTE 379
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