Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05440 and RBAM_032820

See DNA alignment / Visit BSNT_05440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05440___gtaB.1.9828.seq
#    -bsequence pep-align/RBAM_032820___gtaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05440___gtaB-RBAM_032820___gtaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05440___gtaB-RBAM_032820___gtaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05440___gtaB
# 2: RBAM_032820___gtaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     261/294 (88.8%)
# Similarity:   280/294 (95.2%)
# Gaps:           2/294 ( 0.7%)
# Score: 1371.0
# 
#
#=======================================

BSNT_05440___      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGI     50
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_032820__      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVESGI     50

BSNT_05440___     51 EDIIIVTGKSKRAIEDHFDFSPELERNLEEKGKTELLEKVKKASNLADIH    100
                     |||||||||.|||||||||.:||||||||||||.|||:||||:||:||||
RBAM_032820__     51 EDIIIVTGKGKRAIEDHFDNAPELERNLEEKGKIELLQKVKKSSNIADIH    100

BSNT_05440___    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQGEKPGLRQLMDEYE    150
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_032820__    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQAEKPGLRQLMDEYE    150

BSNT_05440___    151 KTLSSVIGVQQVPEDQTHRYGIIDPLTNEGRLYQVKNFVEKPKPGTAPSN    200
                     |||||:||||||||..|||||||||||||||.||||||||||:|||||||
RBAM_032820__    151 KTLSSIIGVQQVPESDTHRYGIIDPLTNEGRRYQVKNFVEKPEPGTAPSN    200

BSNT_05440___    201 LAILGRYVFTPEIFMYLDKQQIGAGGEIQLTDAIQQLNEIQRVFAYDFEG    250
                     |||||||||||||||||::|::|||||||||||||:||:|||||||||||
RBAM_032820__    201 LAILGRYVFTPEIFMYLEQQEVGAGGEIQLTDAIQKLNDIQRVFAYDFEG    250

BSNT_05440___    251 KRYDVGEKLGFIQTTLEFAMQDSELKDSLIPFMQDLLSKEEF--    292
                     ||||||||||||:||||||:||.:::..|||||:|||.|||.  
RBAM_032820__    251 KRYDVGEKLGFIETTLEFALQDQDIRHKLIPFMKDLLEKEEADE    294


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