Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05452 and RBAM_032850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence pep-align/BSNT_05452___tagF.1.9828.seq
# -bsequence pep-align/RBAM_032850___tagF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05452___tagF-RBAM_032850___tagF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05452___tagF-RBAM_032850___tagF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05452___tagF
# 2: RBAM_032850___tagF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 728
# Identity: 428/728 (58.8%)
# Similarity: 541/728 (74.3%)
# Gaps: 21/728 ( 2.9%)
# Score: 2249.0
#
#
#=======================================
BSNT_05452___ 1 MDSAIPIKFQLLEIKINDTGLYFVFESSVSLDHV------DVLAVNRNTK 44
|....|::::|..:.|.:. .|..::|.::| .:..:||.||
RBAM_032850__ 1 MGIENPVRYKLKHLNIKEE----TFSITISCENVTAGEEPSLQIINRKTK 46
BSNT_05452___ 45 KDMRVPCNKISDSKQLKAAKVSLDDLSNLMIDEAVIDFYVLYKNNKKYQC 94
.::.||..:::.......|.:|.|.||:....:..:||||.:.|:.....
RBAM_032850__ 47 AELSVPLKRLAGEGGEYHAVMSTDLLSDHTDGKGCLDFYVSFINDDSDIS 96
BSNT_05452___ 95 KKRIYTASKPIELSWHKDQANQFIYLPYKTLKGHFALDVLRSKAVAEPDS 144
|||:.::.:|||||.:||:|:...:.||.|.||:|:|.:|:.|.|...|.
RBAM_032850__ 97 KKRLKSSLEPIELSSYKDEAHHMFFFPYTTKKGNFSLKLLQKKFVTRIDE 146
BSNT_05452___ 145 MKLCSDGKLMIGGYTFLLDAEERSLVKSRKLVLK-EISQNDKERFFDFPL 193
|:|.|||.|.:.|:.|.|:|.|...:|.:.|:|| :..:.::.....:||
RBAM_032850__ 147 MELESDGSLHLKGFAFRLNAAETLKIKEKNLILKMKKGKEEEPLILKYPL 196
BSNT_05452___ 194 KDVQRGDLSADSSD----HTVGFEVEIDLKKLYEENRMPAFFQFYIEYVG 239
.||.|.||.....| .|:||:.:|||..:|:|......|||:|:::.
RBAM_032850__ 197 HDVPRHDLDEYVQDTTMLDTIGFDTKIDLNAVYKELNQQLTFQFHIQFIF 246
BSNT_05452___ 240 EDAATGEEIIIKSRTFRLID----DIDSFSIVDTKKGPARFHIYPQKRKR 285
|||.||||||..|:..:::. :.:.|:|:.|:|||||||::.:|:.:
RBAM_032850__ 247 EDAGTGEEIITNSKPLKVLKSEQVNPNQFTILKTEKGPARFHVFTKKKTK 296
BSNT_05452___ 286 SMCLRMNDYTIRTRAVYFAKGKGKRLMSVIRKGKNKVKKKISGMVKRAYY 335
::.||||||:..||..||.:||.||..|.:||.|||:||.|...::..|.
RBAM_032850__ 297 NLHLRMNDYSFSTRVEYFVRGKLKRGASFVRKRKNKLKKFIEKRIQNTYK 346
BSNT_05452___ 336 FTFELAGKLPVKKKTVIFESFAGKQYSCNPRAIYEYMKEHHPEYNLIWSV 385
..|.:|||||||:|.|:||||||||||||||||||||.:..|||.|.|||
RBAM_032850__ 347 AGFRVAGKLPVKQKFVMFESFAGKQYSCNPRAIYEYMSKEMPEYRLCWSV 396
BSNT_05452___ 386 NPSYTEIFEEKNVPYINRFTLKWLFAMARAEFWVVNSRLPLWIPKPKHTT 435
||:|::.|::|.:|||.||..||||||||||:||||||:|||||||:|||
RBAM_032850__ 397 NPAYSQTFKDKGIPYIERFKFKWLFAMARAEYWVVNSRMPLWIPKPEHTT 446
BSNT_05452___ 436 YVQTWHGTPLKRLAVDMEEVHMPGTNTEKYKQNFTKEASKWDYLISPNRY 485
|||||||||||||||||:|||||||||||||:|||.||||||||||||.|
RBAM_032850__ 447 YVQTWHGTPLKRLAVDMDEVHMPGTNTEKYKRNFTTEASKWDYLISPNAY 496
BSNT_05452___ 486 STEIFARAFQFNKTMIESGYPRNDFLYTDNRPETMKAIKKKMNIPEDKKV 535
||||||||||||||||||||||||||.|||....:||:|:|||:|:||||
RBAM_032850__ 497 STEIFARAFQFNKTMIESGYPRNDFLQTDNSLSVIKALKEKMNLPQDKKV 546
BSNT_05452___ 536 ILYAPTWRDDQFYKKGKYKFDLDLNMEKLREEIGDNYVIILRMHYLVAEN 585
|:||||||||||||||||||||||::.:|||.|||.||||||||||||||
RBAM_032850__ 547 IIYAPTWRDDQFYKKGKYKFDLDLDLHQLREAIGDRYVIILRMHYLVAEN 596
BSNT_05452___ 586 FDLSPYKGFAYDFSAYEDIRELYMVSDLLITDYSSVFFDFANLKRPMIFF 635
|||.||:|||||||:||||||||||||||||||||||||:|||||||:|:
RBAM_032850__ 597 FDLGPYEGFAYDFSSYEDIRELYMVSDLLITDYSSVFFDYANLKRPMLFY 646
BSNT_05452___ 636 VPDIETYRDKLRGFYFDFEREAPGPLVKTTEGVIEKIKETETSDYRLPDI 685
|||||||||||||||||||:||||||||.|..||:.:.|||:.||:|||.
RBAM_032850__ 647 VPDIETYRDKLRGFYFDFEKEAPGPLVKETGDVIKWVNETESDDYKLPDS 696
BSNT_05452___ 686 FEPFYERFCYLETGNSSEKVVNRIFE-- 711
|.||||:|||||||.||||.|..||.
RBAM_032850__ 697 FGPFYEKFCYLETGESSEKAVKVIFGDK 724
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