Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05481 and RBAM_033130

See DNA alignment / Visit BSNT_05481 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence pep-align/BSNT_05481___rbsB.1.9828.seq
#    -bsequence pep-align/RBAM_033130___rbsB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05481___rbsB-RBAM_033130___rbsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05481___rbsB-RBAM_033130___rbsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05481___rbsB
# 2: RBAM_033130___rbsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     256/305 (83.9%)
# Similarity:   291/305 (95.4%)
# Gaps:           0/305 ( 0.0%)
# Score: 1310.0
# 
#
#=======================================

BSNT_05481___      1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKDFTIGLSVSTLNNP     50
                     ||||:..|..||||||:||||||||||||||:.:||:|||||||||||||
RBAM_033130__      1 MKKAIITIAALSLFLLSACSLEPPQWAKPSNTKHKKEFTIGLSVSTLNNP     50

BSNT_05481___     51 FFVSLKKGIEKEAEKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLIN    100
                     ||||||:|:.|||:||||||||||||||||||::||||||||||||||||
RBAM_033130__     51 FFVSLKEGVVKEAKKRGMKVIIVDAQNDSSKQSNDVEDLIQQGVDALLIN    100

BSNT_05481___    101 PTDSSAISTAVESANAVGVPVVTIDRSAEQGKVETLVASDNVKGGEMAAA    150
                     |||||||||||||||::|:||:.:|||||.|||||||||||||||||||.
RBAM_033130__    101 PTDSSAISTAVESANSLGIPVIALDRSAEHGKVETLVASDNVKGGEMAAD    150

BSNT_05481___    151 FIADKLGKGAKVAELEGVPGASATRERGSGFHNIADQKLHVVTKQSADFD    200
                     ::||:||||||||||:||||||||||||:|||:|||:||.|||||:||||
RBAM_033130__    151 YLADQLGKGAKVAELQGVPGASATRERGTGFHHIADKKLDVVTKQAADFD    200

BSNT_05481___    201 RTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKDILVIGFDG    250
                     ||||||||||||||||||:||||||||||||||||||||||.|||:||||
RBAM_033130__    201 RTKGLTVMENLLQGHPDIKAVFAHNDEMALGALEAINSSGKHILVVGFDG    250

BSNT_05481___    251 NKDALASIKDGKLSATVAQQPELIGKLATEAADDILHGKKVQKTISAPLK    300
                     ||||::|||:|||:||||||||||||||.|||:.:|.|:||::|||||||
RBAM_033130__    251 NKDAISSIKNGKLTATVAQQPELIGKLAAEAAEQVLKGEKVKRTISAPLK    300

BSNT_05481___    301 LETQK    305
                     |:|||
RBAM_033130__    301 LQTQK    305


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