Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05497 and RBAM_033220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05497___cotH.1.9828.seq
# -bsequence pep-align/RBAM_033220___cotH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05497___cotH-RBAM_033220___cotH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05497___cotH-RBAM_033220___cotH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05497___cotH
# 2: RBAM_033220___cotH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 289/364 (79.4%)
# Similarity: 332/364 (91.2%)
# Gaps: 2/364 ( 0.5%)
# Score: 1594.0
#
#
#=======================================
BSNT_05497___ 1 MKNQSNLPLYQLFVHPKDLRELKKDIWDDDPVPAVMKVNQKRLDIDIAYR 50
||:||.|||||||:|||||.|||||||||||||||::|||||||||:|||
RBAM_033220__ 1 MKDQSTLPLYQLFIHPKDLMELKKDIWDDDPVPAVLRVNQKRLDIDLAYR 50
BSNT_05497___ 51 GSHIRDFKKKSYHISFYQPKTFRGAREIHLNAEYKDPSLMRNKLSLDFFS 100
||||||||||||||:||.|||||.|:||||||||||||:||||||||||:
RBAM_033220__ 51 GSHIRDFKKKSYHIAFYSPKTFRRAKEIHLNAEYKDPSMMRNKLSLDFFA 100
BSNT_05497___ 101 ELGTLSPKAEFVFVKVNGKNEGVYLELESVDEYYLAKRKLADGAIFYAVD 150
|||||||||.||.:::||::|||||||||||||:||||.|||||:|||||
RBAM_033220__ 101 ELGTLSPKANFVTLQINGRHEGVYLELESVDEYFLAKRNLADGAVFYAVD 150
BSNT_05497___ 151 DDANFSLMSDLEKETKTSLELGYEKKTGTVEDDFYLQDMIFKINTVPKAQ 200
|||||||:||||::|||||||||||||||.|||.||||||:|||||||::
RBAM_033220__ 151 DDANFSLVSDLERDTKTSLELGYEKKTGTKEDDLYLQDMIYKINTVPKSE 200
BSNT_05497___ 201 FKSEVTKHVDVDKYLRWLAGIVFTSNYDGFVHNYALYRSGETGLFEVIPW 250
||.|:.||:|.|||||||||||||||||||||||||||:.||||||||||
RBAM_033220__ 201 FKGEIVKHLDADKYLRWLAGIVFTSNYDGFVHNYALYRNHETGLFEVIPW 250
BSNT_05497___ 251 DYDATWGRDIHGERMAADYVRIQGFNTLTARILDESEFRKSYKRLLEKTL 300
||||||||||||:||.|||||||||||||||:|||..|||:||||||:||
RBAM_033220__ 251 DYDATWGRDIHGDRMEADYVRIQGFNTLTARLLDEPYFRKAYKRLLEETL 300
BSNT_05497___ 301 QSLFTIEYMEPKIMAMYEQIRPFILMDPYKKNDVERFDREPDVICEYIKN 350
|:.||||:|:||:|::||.|||.:..|||||.:::.|||||:|||||||.
RBAM_033220__ 301 QTRFTIEHMKPKVMSLYEHIRPHVAKDPYKKEEMDCFDREPEVICEYIKE 350
BSNT_05497___ 351 RSQYLKNNLSIL-- 362
||.::.:.|...
RBAM_033220__ 351 RSAFISSELERWNI 364
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