Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05527 and RBAM_033440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence pep-align/BSNT_05527.1.9828.seq
# -bsequence pep-align/RBAM_033440___ywqG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05527-RBAM_033440___ywqG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05527-RBAM_033440___ywqG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05527
# 2: RBAM_033440___ywqG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity: 99/265 (37.4%)
# Similarity: 122/265 (46.0%)
# Gaps: 115/265 (43.4%)
# Score: 552.0
#
#
#=======================================
BSNT_05527 0 -------------------------------------------------- 0
RBAM_033440__ 1 MEKTWKLPKQMESSRGLLETSARRFIKLHVKKAETGRYDSKIAGDPYFPK 50
BSNT_05527 0 -------------------------------------------------- 0
RBAM_033440__ 51 HEPYPKDESGRPMKLLAQINFADMPGLPDFPDTGILQFYISVSDDVYGLN 100
BSNT_05527 1 -----------MIYFENIIENEDELVSDFSFIGTGEC-DFPILSEAAVEP 38
:.|||::...|.||:.||||:...|. ||||.|||.:.|
RBAM_033440__ 101 FDDGCAQTGFCVKYFEHVTAEEAELMDDFSFVHVEEAYDFPIQSEALITP 150
BSNT_05527 39 VKSSEWVLPTDFQFEQYTGMETMEFFGQFGEDEEDIYNELAENGFGHKIG 88
..|:|||||:||||.||.||:..::|.|| ::::|:|...|.||||||
RBAM_033440__ 151 ELSAEWVLPSDFQFRQYAGMDAFDYFEQF---DDEVYDEYTANAFGHKIG 197
BSNT_05527 89 GYASFTQHDPREYAYKEHTIMLLQIDSDDDIDSMWGDVGIANFFITPDDL 138
|||||||.|||.|:::.|||:||||||||||||||||||||||||.|:||
RBAM_033440__ 198 GYASFTQEDPRSYSHQNHTILLLQIDSDDDIDSMWGDVGIANFFIRPEDL 247
BSNT_05527 139 RKKDFSNVLYNWDCS 153
::|||||||||||||
RBAM_033440__ 248 KRKDFSNVLYNWDCS 262
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