Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05530 and RBAM_033450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence pep-align/BSNT_05530___ywqF.1.9828.seq
# -bsequence pep-align/RBAM_033450___ywqF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05530___ywqF-RBAM_033450___ywqF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05530___ywqF-RBAM_033450___ywqF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05530___ywqF
# 2: RBAM_033450___ywqF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 331/445 (74.4%)
# Similarity: 381/445 (85.6%)
# Gaps: 9/445 ( 2.0%)
# Score: 1713.5
#
#
#=======================================
BSNT_05530___ 1 MNITVIGTGYVGLVTGVSLSEIGHHVTCIDIDAHKIDEMRKGISPIFEPG 50
|.||||||||||||||||||||||.|||||||..|:::||||:|||||||
RBAM_033450__ 1 MKITVIGTGYVGLVTGVSLSEIGHDVTCIDIDERKVEQMRKGLSPIFEPG 50
BSNT_05530___ 51 LEELMRKNTADGRLNFEKSYEKGLAQADIIFIAVGTPQKSDGHANLEQIT 100
||::|::|....||.||.|||||||:||:||||||||||.||||||..|.
RBAM_033450__ 51 LEDMMKRNIGRHRLAFETSYEKGLAEADVIFIAVGTPQKEDGHANLTYIE 100
BSNT_05530___ 101 DAAKRIAKHVKRDTVVVTKSTVPVGTNDLINGLITEHLAEPVSISVASNP 150
:.|:|||:|:.:|.:|||||||||||||.|:.:|...|...|:||:||||
RBAM_033450__ 101 NVAERIAEHICKDAIVVTKSTVPVGTNDRISEVIHSRLKADVNISIASNP 150
BSNT_05530___ 151 EFLREGSAIYDTFHGDRIVIGTADEKTANTLEELFRPFQIPIYQTDIRSA 200
|||||||||:|||||||||||..|.:|..||:.:|.|..||:|.||||||
RBAM_033450__ 151 EFLREGSAIHDTFHGDRIVIGAEDRQTRETLDRVFAPLAIPVYHTDIRSA 200
BSNT_05530___ 201 EMIKYASNAFLATKISFINEISNICEKVGADIEAVAYGMGQDKRIGSQFL 250
||||||||||||.|||||||||:||||||||:|:||:|||.|||||:|||
RBAM_033450__ 201 EMIKYASNAFLAAKISFINEISHICEKVGADVESVAHGMGLDKRIGNQFL 250
BSNT_05530___ 251 KAGIGYGGSCFPKDTNALVQIAGNVEHDFELLKSVIKVNNNQQAMLVDKA 300
:||||||||||||||||||||||:|||||||||||||||||||:|||||.
RBAM_033450__ 251 RAGIGYGGSCFPKDTNALVQIAGHVEHDFELLKSVIKVNNNQQSMLVDKV 300
BSNT_05530___ 301 LNRLGGVTGKTIALLGLSFKPNTDDMREAPSIVIADRLAALDARIRAYDP 350
|||||||||||||||||||||||||||:||||||||||||||||:.||||
RBAM_033450__ 301 LNRLGGVTGKTIALLGLSFKPNTDDMRDAPSIVIADRLAALDARMTAYDP 350
BSNT_05530___ 351 IAVGHAKHVLPQAVEYKETIEEAVKGSDAVMILTDWADIKQFPLAAYQDL 400
||...|..:||..|.|:|:|||||:|:|||:|||||..||.|||.||::|
RBAM_033450__ 351 IASFRASGLLPAEVSYRESIEEAVRGADAVLILTDWEQIKHFPLEAYKEL 400
BSNT_05530___ 401 MESPLIFDGRNCYTLDEAAAVGVEYYSVGRKAVVPSGAIQ----- 440
||:|:|||||||::|:||...||||.|:||:|||| |
RBAM_033450__ 401 METPVIFDGRNCHSLEEAEQAGVEYISIGRRAVVP----QTDSVT 441
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