Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05568 and RBAM_033660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence pep-align/BSNT_05568___ywoD.1.9828.seq
# -bsequence pep-align/RBAM_033660___ywoD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05568___ywoD-RBAM_033660___ywoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05568___ywoD-RBAM_033660___ywoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05568___ywoD
# 2: RBAM_033660___ywoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 363/454 (80.0%)
# Similarity: 407/454 (89.6%)
# Gaps: 2/454 ( 0.4%)
# Score: 1881.0
#
#
#=======================================
BSNT_05568___ 1 -MLSKKSRAVFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFTTVSWL 49
.:|||||.:||||||||||||||||||||||||||||||||||||||||
RBAM_033660__ 1 MTISKKSRVLFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFTTVSWL 50
BSNT_05568___ 50 ISSFYLASAVAQPVTGKLGDLIGRKRLFLFGLILVAVSAIGAPFAPTFMT 99
||||||||||||||||||||::|||:|||.||:||||||:||||||||||
RBAM_033660__ 51 ISSFYLASAVAQPVTGKLGDMLGRKKLFLIGLLLVAVSAVGAPFAPTFMT 100
BSNT_05568___ 100 LLVMRLFQSVGSSAIYPSGVGLIRNHIHERQASALAVLSIFASAMTALGP 149
||:||||||:||||||||||||||::|.|:||||||||||||||||||||
RBAM_033660__ 101 LLIMRLFQSIGSSAIYPSGVGLIRSNIQEKQASALAVLSIFASAMTALGP 150
BSNT_05568___ 150 TVGGFLIVWGGWPAIFIVNLPFIILSFLLGLYMFPKDQKKG-AGIKTIIQ 198
|:||||||||||||||.||||||||||.||:||||||:|:. .|:|.:::
RBAM_033660__ 151 TLGGFLIVWGGWPAIFFVNLPFIILSFFLGMYMFPKDEKREIGGLKGVLR 200
BSNT_05568___ 199 QLDILGIVLFAGGIIFLLSFLLSFSTSPHAVEGVLGLLLLCAFVWRELKT 248
|||.:||:||||.||.||||||||||.||..|||.|||.:..|:||||||
RBAM_033660__ 201 QLDTIGILLFAGAIILLLSFLLSFSTKPHYTEGVFGLLFVGLFIWRELKT 250
BSNT_05568___ 249 DKPFIDVRLFKTQRNLSAVYVQFILLNVFFYCLFFGLPSYFQDEMHLSVQ 298
:|||||||||||.|.||:||:||||||:||||:|||||||||||||||||
RBAM_033660__ 251 EKPFIDVRLFKTHRKLSSVYIQFILLNIFFYCIFFGLPSYFQDEMHLSVQ 300
BSNT_05568___ 299 TSGLFMLFMSGMSIVVSPLTGKWIDRSGVVKPIFAGALLMTAGAVLLTIF 348
||||.|||||||||:||||||||||:.|:::||.||..|...||||||.|
RBAM_033660__ 301 TSGLIMLFMSGMSILVSPLTGKWIDKKGLLQPIVAGTCLTAIGAVLLTFF 350
BSNT_05568___ 349 FINVETIGKGLILSLLGIGYGLGNVALQAAMLKTSPSNMVGTTSGLFQTC 398
|:....||||||||:||:|||||||..|||||||||::||||||||||||
RBAM_033660__ 351 FLQAPMIGKGLILSVLGVGYGLGNVTFQAAMLKTSPADMVGTTSGLFQTC 400
BSNT_05568___ 399 RYLGSILSSVILGILFGKEITAAHFDMMGIIMIIAGGASLLMAVRFAALM 448
||||||||||||||||||||||.||.|:|.|:|:.|..|||||.||:.|:
RBAM_033660__ 401 RYLGSILSSVILGILFGKEITAGHFHMLGTILIVVGAVSLLMAFRFSVLL 450
BSNT_05568___ 449 KTAS 452
|.||
RBAM_033660__ 451 KKAS 454
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