Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05578 and RBAM_033720

See DNA alignment / Visit BSNT_05578 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence pep-align/BSNT_05578___ywnJ.1.9828.seq
#    -bsequence pep-align/RBAM_033720___ywnJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05578___ywnJ-RBAM_033720___ywnJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05578___ywnJ-RBAM_033720___ywnJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05578___ywnJ
# 2: RBAM_033720___ywnJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      74/146 (50.7%)
# Similarity:    98/146 (67.1%)
# Gaps:          12/146 ( 8.2%)
# Score: 382.0
# 
#
#=======================================

BSNT_05578___      1 MNRLLLAGWIFFILLSVCTESFSGMVVSQTVAFHFQPHPELSQFLVMDFT     50
                     ||:.|.|||:.|:.:|..||||..|:|||||:|.|.|||::|.|.|.|..
RBAM_033720__      1 MNKCLAAGWLVFVFVSALTESFHDMIVSQTVSFRFTPHPDVSGFFVFDMA     50

BSNT_05578___     51 ELTVPEAFIQKIGHAFSFFVLTYLLWKQRGSIRSASAGSFAFAFFTEVLQ    100
                     ||.:|||.|||:|||||||||.||.:::|..::.|...:.|.||.||::|
RBAM_033720__     51 ELAIPEAVIQKLGHAFSFFVLAYLFFRERRRMKRAVLYALAAAFLTEIVQ    100

BSNT_05578___    101 LFFSRNGCIRDVLIDAVGIGLFYVLYVLAKRRKQEMYEKY------    140
                     |||.||||:||||||::||..|..|    :|:|..  .|:      
RBAM_033720__    101 LFFGRNGCLRDVLIDSLGIAAFCAL----QRKKHT--AKHTKTGSL    140


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