Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05601 and RBAM_033860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence pep-align/BSNT_05601___rapB.1.9828.seq
# -bsequence pep-align/RBAM_033860___rapB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05601___rapB-RBAM_033860___rapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05601___rapB-RBAM_033860___rapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05601___rapB
# 2: RBAM_033860___rapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity: 288/377 (76.4%)
# Similarity: 335/377 (88.9%)
# Gaps: 1/377 ( 0.3%)
# Score: 1558.0
#
#
#=======================================
BSNT_05601___ 1 MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLL 50
|.||||||||||||||||||||||||.|||:|||||||.||::|||||||
RBAM_033860__ 1 MTAYEIPSSQVGVKINKWYKHILAFQAADAIKLKEEIDEDIQRMEEDQLL 50
BSNT_05601___ 51 LLYYQLISYRHQIMLDYVKPDLHEESQLQYRELIKTLESNQDSISGLSEY 100
|||||||||||.||||||||:..|:||:||.||.||:||. |||||||||
RBAM_033860__ 51 LLYYQLISYRHHIMLDYVKPECTEQSQIQYSELQKTIEST-DSISGLSEY 99
BSNT_05601___ 101 YFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVF 150
|||||||||||:.|||::||||||||||:|:||||:|||||||||::|||
RBAM_033860__ 100 YFHLFRGMYEFDHNNYVAAISFYRKAEKLLSFVEDDIERAEFHFKMSEVF 149
BSNT_05601___ 151 YIMKQTHFSMNHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKA 200
|:||||||||||.:|||:||..|||||||||||||||||||||.:||:||
RBAM_033860__ 150 YVMKQTHFSMNHGIQALDTYMKHDFYRVRRIQCHFVISGNYIDCKNYDKA 199
BSNT_05601___ 201 LEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQAAEYFEKALTV 250
|||||:|.||:|||||||||||:|||:||||.:|.:||:||.||.||:.|
RBAM_033860__ 200 LEHLDEALRLSLLEGQPRLIGSSLYNLGNCYSEKRDLDEAARYFRKAVPV 249
BSNT_05601___ 251 FEDYQLEQLPKALFSLTRVLFKKQDSEAAMRYYEKGIAIAQKRNDFFSLA 300
||::|||||||||||||..||:..|.:||:.|||:|:.||::|.|.|||.
RBAM_033860__ 250 FEEHQLEQLPKALFSLTHTLFRLHDDQAALTYYERGVMIAKERGDRFSLE 299
BSNT_05601___ 301 KYKFLQALYVESVNLDMIQEVFDYMEEKGLYVYIEEFALDAASYFSHHEQ 350
|||||||||:||:|:|:|.||||||.||.||||||:|||:||.|.|.|||
RBAM_033860__ 300 KYKFLQALYLESLNMDLIHEVFDYMNEKSLYVYIEDFALEAAVYTSAHEQ 349
BSNT_05601___ 351 YKEAVYFYEKAVSMREMIQRNDCLYEV 377
||||.||||||:.|||.||:..|||::
RBAM_033860__ 350 YKEAAYFYEKAIRMRENIQKEQCLYDI 376
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