Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05620 and RBAM_033960

See DNA alignment / Visit BSNT_05620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence pep-align/BSNT_05620___atpC.1.9828.seq
#    -bsequence pep-align/RBAM_033960___atpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05620___atpC-RBAM_033960___atpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05620___atpC-RBAM_033960___atpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05620___atpC
# 2: RBAM_033960___atpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:     119/132 (90.2%)
# Similarity:   127/132 (96.2%)
# Gaps:           0/132 ( 0.0%)
# Score: 595.0
# 
#
#=======================================

BSNT_05620___      1 MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033960__      1 MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAV     50

BSNT_05620___     51 RLKKDGQTEMVAVSGGFVEVRPDQVTILAQAAETAEGIDKERAEAARQRA    100
                     |||||||||:.||||||:||||||||||||||||||.||||||.||::||
RBAM_033960__     51 RLKKDGQTELAAVSGGFLEVRPDQVTILAQAAETAESIDKERALAAKKRA    100

BSNT_05620___    101 QERLNSQSDDTDIRRAELALQRALNRLDVAGK    132
                     ::|||.:||||||||||||||||:|||||||.
RBAM_033960__    101 EDRLNKRSDDTDIRRAELALQRAVNRLDVAGN    132


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