Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05623 and RBAM_033980

See DNA alignment / Visit BSNT_05623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_05623___atpG.1.9828.seq
#    -bsequence pep-align/RBAM_033980___atpG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05623___atpG-RBAM_033980___atpG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05623___atpG-RBAM_033980___atpG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05623___atpG
# 2: RBAM_033980___atpG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     259/287 (90.2%)
# Similarity:   273/287 (95.1%)
# Gaps:           0/287 ( 0.0%)
# Score: 1295.0
# 
#
#=======================================

BSNT_05623___      1 MASLRDIKSRITSTKKTSQITKAMQMVSAAKLNRAENNAKSFVPYMDKIQ     50
                     ||||||||||||||||||||||||||||||||||||.|||||.|||||||
RBAM_033980__      1 MASLRDIKSRITSTKKTSQITKAMQMVSAAKLNRAETNAKSFAPYMDKIQ     50

BSNT_05623___     51 EVVSNVGRVSGNVKHPMLLSREVKKTAYLVITSDRGLAGAFNSSVLRNAY    100
                     |||.|||:.:.|.|||||:|||||||||||||||||||||||||||||||
RBAM_033980__     51 EVVFNVGKGAKNAKHPMLVSREVKKTAYLVITSDRGLAGAFNSSVLRNAY    100

BSNT_05623___    101 QAMQERHQSKDEYAVIAIGRVGRDFFKKREIPIISELTGLGDEVTFTEIK    150
                     :.:||||||||||.||||||||||||||||:||:|||.||||||||.:||
RBAM_033980__    101 RTIQERHQSKDEYTVIAIGRVGRDFFKKREMPILSELVGLGDEVTFAQIK    150

BSNT_05623___    151 DLARQTIQMFIDGAFDELHLVYNHFVSAITQEVTEKKLLPLSDLGSGGGK    200
                     ||.|||:||||||||||||||||||||||:|||||||:|||:|.|:.|||
RBAM_033980__    151 DLTRQTVQMFIDGAFDELHLVYNHFVSAISQEVTEKKVLPLTDFGTSGGK    200

BSNT_05623___    201 RTASYEFEPSEEEVLEVLLPQYAESLIFGALLDSKASEHAARMTAMKNAT    250
                     |||||||||.|||||||||||||||||:||||||||||||||||||||||
RBAM_033980__    201 RTASYEFEPDEEEVLEVLLPQYAESLIYGALLDSKASEHAARMTAMKNAT    250

BSNT_05623___    251 DNAKELIDSLSLSYNRARQAAITQEITEIVGGAAALE    287
                     |||||||||||||||||||||||||||||||||||||
RBAM_033980__    251 DNAKELIDSLSLSYNRARQAAITQEITEIVGGAAALE    287


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