Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05682 and RBAM_034340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence pep-align/BSNT_05682___ywjE.1.9828.seq
# -bsequence pep-align/RBAM_034340___ywjE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05682___ywjE-RBAM_034340___ywjE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05682___ywjE-RBAM_034340___ywjE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05682___ywjE
# 2: RBAM_034340___ywjE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 282/399 (70.7%)
# Similarity: 332/399 (83.2%)
# Gaps: 1/399 ( 0.3%)
# Score: 1497.0
#
#
#=======================================
BSNT_05682___ 1 MKVFIVIMIIVVIFFALILLDIFMGRAGYRKKAYEPVFSKKKSDIELIHC 50
|||..|:::|.:|..||:|||:.:|||.|:|:||||||..|||||.||||
RBAM_034340__ 1 MKVIFVLLVIFIILIALMLLDMLLGRAAYKKQAYEPVFDPKKSDITLIHC 50
BSNT_05682___ 51 GADLVERMMKDIRQAASSVHMMFFIMKNDEVSHNMYTLLKTKAQAGVSVY 100
|::||.:|..|||||.||:||||||||||:|||.|:.|||.|||||||||
RBAM_034340__ 51 GSELVRQMTADIRQAVSSIHMMFFIMKNDQVSHEMFDLLKEKAQAGVSVY 100
BSNT_05682___ 101 LLLDWAGCRAIKKTALQTMKNAGVHVHVMNRPRFPFFFFHMQKRNHRKIT 150
|||||||.|.:||.::||||.||||||.:|:|.|||.||.:|||||||:|
RBAM_034340__ 101 LLLDWAGSRQVKKPSIQTMKKAGVHVHFLNKPAFPFLFFRLQKRNHRKVT 150
BSNT_05682___ 151 VIDGKIGYIGGFNIAEEYLGKKAKFGNWEDYHLRMMGEGVHDLQTLFASD 200
||||||||:||||||||||||||||||||||||||.|||..||||||.||
RBAM_034340__ 151 VIDGKIGYVGGFNIAEEYLGKKAKFGNWEDYHLRMTGEGTADLQTLFVSD 200
BSNT_05682___ 201 LKRNTGIELGS-DVWPKLQQGAISHKIYATDGYSLENIYLANIAQAKNRL 249
||||||...|| :|:|.|.:|.|||:.||:||:|||:.|...|.:|:.::
RBAM_034340__ 201 LKRNTGKAPGSPEVYPALSEGNISHRTYASDGFSLESHYENCIRKAEKKI 250
BSNT_05682___ 250 TVCTPYYIPSKPLQEALINARKNGVSVRIIVPMKSDHPLVREAAFTYYSE 299
.:.||||:|||.||||||:|.:.||.|.:|||||||||||||.|||||.|
RBAM_034340__ 251 IIGTPYYVPSKKLQEALISACRKGVKVILIVPMKSDHPLVRETAFTYYPE 300
BSNT_05682___ 300 LLDAGCLIYRYYQGFYHVKALIIDDHLSIIGTANFDKRSLFLNEEVNVEI 349
||.|||||||||||||||||.||||.:|||||.||||||||.||||||.|
RBAM_034340__ 301 LLKAGCLIYRYYQGFYHVKAFIIDDRISIIGTPNFDKRSLFWNEEVNVII 350
BSNT_05682___ 350 DDEAFTSEVYATIEEDMKKSERLTMEDFSKRTFRQRPAEWLGRALSYFL 398
.|||||.||.:||::|::|||.||:|...:|:.||.||||||:|:||||
RBAM_034340__ 351 HDEAFTKEVLSTIKQDIEKSELLTLEKVKQRSVRQLPAEWLGKAISYFL 399
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