Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05684 and RBAM_034350

See DNA alignment / Visit BSNT_05684 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence pep-align/BSNT_05684___uvsE.1.9828.seq
#    -bsequence pep-align/RBAM_034350___uvsE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05684___uvsE-RBAM_034350___uvsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05684___uvsE-RBAM_034350___uvsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05684___uvsE
# 2: RBAM_034350___uvsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     249/320 (77.8%)
# Similarity:   293/320 (91.6%)
# Gaps:           0/320 ( 0.0%)
# Score: 1371.0
# 
#
#=======================================

BSNT_05684___      1 MIFRFGFVSNAMSLWDASPAKTLTFARYSKLSKTERKEALLTVTKANLHN     50
                     |:||||||:|||.|||||||||||:|||:|||::|||:|||:||||||.|
RBAM_034350__      1 MLFRFGFVANAMCLWDASPAKTLTYARYTKLSRSERKDALLSVTKANLTN     50

BSNT_05684___     51 TMRTLHYIIGHGIPLYRFSSSIVPLATHPDVMWDFVTPFQKEFREIGELV    100
                     |:||:||::||||||||||||||||||||||:|||||||::||.|||.||
RBAM_034350__     51 TLRTIHYVVGHGIPLYRFSSSIVPLATHPDVLWDFVTPFRQEFCEIGGLV    100

BSNT_05684___    101 KTHQLRTSFHPNQFTLFTSPKESVTKNAVTDMAYHYRMLEAMGIADRSVI    150
                     :.:.|||||||||||||||||:.:|.|||.||||||.||:|||||:||||
RBAM_034350__    101 RKYDLRTSFHPNQFTLFTSPKQEITANAVKDMAYHYDMLDAMGIANRSVI    150

BSNT_05684___    151 NIHIGGAYGNKDTATAQFHQNIKQLPQEIKERMTLENDDKTYTTEETLQV    200
                     |||:|||||:|.:|..:|..|:|:||..||:||||||||||||:||||.|
RBAM_034350__    151 NIHVGGAYGDKQSALGRFRVNLKELPDVIKQRMTLENDDKTYTSEETLSV    200

BSNT_05684___    201 CEQEDVPFVFDFHHFYANPDDHADLNVALPRMIKTWERIGLQPKVHLSSP    250
                     ||||.:|||||:|||||||.|.|||:..||||||||:||||:||||||||
RBAM_034350__    201 CEQEGIPFVFDYHHFYANPTDDADLDDILPRMIKTWQRIGLKPKVHLSSP    250

BSNT_05684___    251 KSEQAIRSHADYVDANFLLPLLERFRQWGTNIDFMIEAKQKDKALLRLMD    300
                     |||.|||||||||||||:||:|||||||.|:||||||||:||:|||||::
RBAM_034350__    251 KSESAIRSHADYVDANFILPVLERFRQWDTDIDFMIEAKEKDRALLRLVE    300

BSNT_05684___    301 ELSSIRGVKRLGGGALQWKS    320
                     |||:|||||||.||.|:||:
RBAM_034350__    301 ELSAIRGVKRLAGGVLKWKA    320


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