Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05737 and RBAM_034640

See DNA alignment / Visit BSNT_05737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence pep-align/BSNT_05737.1.9828.seq
#    -bsequence pep-align/RBAM_034640.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05737-RBAM_034640.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05737-RBAM_034640.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05737
# 2: RBAM_034640
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      69/146 (47.3%)
# Similarity:    93/146 (63.7%)
# Gaps:           5/146 ( 3.4%)
# Score: 357.5
# 
#
#=======================================

BSNT_05737         1 MYETIRVGDWLIKADVEETRKQYEKDIEDMCECGNCLNYYEAVNELPVQK     50
                     |:....:|.|:|:||.|||||||||...|.|:||:|.|:.||||.||.:|
RBAM_034640        1 MFTVFEIGPWVIEADAEETRKQYEKSWPDPCDCGSCRNFSEAVNLLPAEK     50

BSNT_05737        51 AQVLESFGLIPSKCTDINYHGVKDHLHFYIASYFIVGRIVEGKQEWNPKK    100
                     .::...||:.|:.|.|:..||.::.||.|..||.||||:.||   |....
RBAM_034640       51 TRLFTQFGIRPAVCHDLGEHGKENGLHHYAGSYPIVGRLREG---WPNFH     97

BSNT_05737       101 IDFSWHI--SFSVPQHQIYIPKGFPKPIIQLDCVTLLPWVIDQPYE    144
                     |:.:..|  |||:|....:||||||.|||.||...|||||:::..:
RBAM_034640       98 IERAGDIRFSFSLPSTTFFIPKGFPDPIIHLDFSLLLPWVLEEDAD    143


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