Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05738 and RBAM_034650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_05738___ywhD.1.9828.seq
# -bsequence pep-align/RBAM_034650___ywhD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05738___ywhD-RBAM_034650___ywhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05738___ywhD-RBAM_034650___ywhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05738___ywhD
# 2: RBAM_034650___ywhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 159/172 (92.4%)
# Similarity: 164/172 (95.3%)
# Gaps: 0/172 ( 0.0%)
# Score: 839.0
#
#
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BSNT_05738___ 1 MEEKKKKSIGFNIIKSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFVD 50
|||||||:||||||||||||||||||.|||||||||||||||||||||||
RBAM_034650__ 1 MEEKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVFVDVEEKEAFVD 50
BSNT_05738___ 51 IGAMHARSTVEKGIKFLPNKEEVPNGKPYWLVWVTIDRKEEGPYYAGVTA 100
||||||||.|||||||||||:|||||||||||||||||||||||||||||
RBAM_034650__ 51 IGAMHARSVVEKGIKFLPNKDEVPNGKPYWLVWVTIDRKEEGPYYAGVTA 100
BSNT_05738___ 101 CEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLKK 150
|||||||||||||||||||||||||||||.|||||||.|||:||.|||:|
RBAM_034650__ 101 CEMTVDRSIRRGYKSLPEHVNLMDKSMKRCIIVDKMDASSKQVLAEFLQK 150
BSNT_05738___ 151 HDQGLWDRSSDELKTSLLPENN 172
||||||:||||||||.||||..
RBAM_034650__ 151 HDQGLWERSSDELKTGLLPEEK 172
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