Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05779 and RBAM_034970

See DNA alignment / Visit BSNT_05779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:17
# Commandline: needle
#    -asequence pep-align/BSNT_05779___rocB.1.9828.seq
#    -bsequence pep-align/RBAM_034970___rocB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05779___rocB-RBAM_034970___rocB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05779___rocB-RBAM_034970___rocB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05779___rocB
# 2: RBAM_034970___rocB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity:     442/566 (78.1%)
# Similarity:   507/566 (89.6%)
# Gaps:           6/566 ( 1.1%)
# Score: 2428.0
# 
#
#=======================================

BSNT_05779___      1 MQYTKISHMNPAERVEALTASLVSLSSVNGTVGEGTKADFIKEVITSYPY     50
                      .|.::|.|.|.|::||:|.|||:|:|:|||:|||.|||:||::|.|:||
RBAM_034970__      1 -MYQQLSKMLPEEKIEAITKSLVALNSINGTLGEGKKADYIKDMIKSFPY     49

BSNT_05779___     51 FQENPSHVWEQAIPNDPYNRKNIFAFIKGHGESRNTVIYHAHLDTVGIED    100
                     ||||||||||||||.|||.||||||||:|:|||.||||||||||||||||
RBAM_034970__     50 FQENPSHVWEQAIPEDPYGRKNIFAFIEGNGESLNTVIYHAHLDTVGIED     99

BSNT_05779___    101 FGPLKDIAFDCEKLAEYFSRYEFDQDVQRDAKSGDWMFGRGSVDMQSGIA    150
                     ||||||||||.::||||||.||||:||||||:||:|||||||||||||||
RBAM_034970__    100 FGPLKDIAFDSDRLAEYFSNYEFDRDVQRDARSGEWMFGRGSVDMQSGIA    149

BSNT_05779___    151 VHLANLLHFSENLETLPGNVLFMANPDEESQHSGILASISELNRLKKEKQ    200
                     |||||||||||..:.|||::||||||||||||||||.|||||.|||:|||
RBAM_034970__    150 VHLANLLHFSERRDQLPGHILFMANPDEESQHSGILTSISELKRLKQEKQ    199

BSNT_05779___    201 LHYLAAINTDFITPLYDGDQTRYIYTGAAGKLLPCFYIYGREVHVGDTLA    250
                     |.||||||.|||||||:||.||||||||||||||||.||||||||||||:
RBAM_034970__    200 LRYLAAINNDFITPLYEGDTTRYIYTGAAGKLLPCFAIYGREVHVGDTLS    249

BSNT_05779___    251 GIDPNFISSEITSRLHNNIHLAEKVEGELVLPPSCLYQRDNKESYNVQTA    300
                     |||||.|:||||.|:|||||:||.:||||||||:|||||||||:||||||
RBAM_034970__    250 GIDPNLIASEITRRIHNNIHMAENIEGELVLPPTCLYQRDNKEAYNVQTA    299

BSNT_05779___    301 VSTSLYFNCFIYERTAKEMMDLLIEVTEEACQETEQKLSDYYEEYAKRAN    350
                     ||:.:|||.||||:|||.:||.|..|.:|||:||||||||||:||.:|.:
RBAM_034970__    300 VSSYVYFNYFIYEKTAKVVMDQLTAVADEACRETEQKLSDYYDEYCERTS    349

BSNT_05779___    351 LPKKHLSWDIQVYSLEQYLEKLRNRGIDPEQCIEQTFKANEHLELRMRCF    400
                     ||||.:||::||||||.||::||:|||||.|||||.||..||||||||||
RBAM_034970__    350 LPKKEMSWNVQVYSLEDYLKRLRSRGIDPAQCIEQAFKTYEHLELRMRCF    399

BSNT_05779___    401 QAIEELQKLDPDQGAKVILFYAPPYLPHNYLKEDSARDQLLQHVIKEAAD    450
                     :|:||||||||:||||||:||||||||||||||:|:||:||||||:||.|
RBAM_034970__    400 KAVEELQKLDPEQGAKVIIFYAPPYLPHNYLKEESSRDRLLQHVIQEAVD    449

BSNT_05779___    451 KTAESTGETFVFKKFFPYLADGSFLSLHETDGEIDSFIRNFPGWNMIGTI    500
                     |||.|||||||||||||||||||||||||||.|:.:|..|||||::||||
RBAM_034970__    450 KTAASTGETFVFKKFFPYLADGSFLSLHETDEEVSAFTDNFPGWDVIGTI    499

BSNT_05779___    501 PFKDIRKLNIPSINMGVYGKDGHKWTERVYKPYTFHVLPLLIQQTTVHLL    550
                     |||:||:|||||:|:||||||||||||||||||||||||.||||||:|||
RBAM_034970__    500 PFKEIRELNIPSVNIGVYGKDGHKWTERVYKPYTFHVLPELIQQTTMHLL    549

BSNT_05779___    551 QSYRMTITAKEPKGEG    566
                     .|||:.|....     
RBAM_034970__    550 HSYRLDIRTNG-----    560


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