Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00453 and RBAM_035010
See
DNA alignment /
Visit
BSNT_00453 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence pep-align/BSNT_00453___ycbL.1.9828.seq
# -bsequence pep-align/RBAM_035010.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00453___ycbL-RBAM_035010.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00453___ycbL-RBAM_035010.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00453___ycbL
# 2: RBAM_035010
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 135/236 (57.2%)
# Similarity: 176/236 (74.6%)
# Gaps: 10/236 ( 4.2%)
# Score: 697.5
#
#
#=======================================
BSNT_00453___ 1 -MQRILLVEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQQGSYDLV 49
..:||:||||..||:||...||||||.:..||:|||.:.:.....::::
RBAM_035010 1 MGYKILIVEDDQFISDMVSESLTKEGFEVTAAFNGEEALDILNTQKFEVI 50
BSNT_00453___ 50 LLDIMLPKLNGMDFLKIIREKSNVPVLMISAKDGDVDKALGLGFGADDYI 99
|||:||||::||:.|::||.||.||||::||||.|||||||||.||||||
RBAM_035010 51 LLDLMLPKIDGMECLRMIRSKSMVPVLIMSAKDEDVDKALGLGLGADDYI 100
BSNT_00453___ 100 AKPFSMIELTARVKAAIRRATQY-----SAEEPAVNKVIRIHQLAIDIDN 144
:|||||:|:.||:||.|||...| |.|| |:|:|..|::|:..
RBAM_035010 101 SKPFSMLEVIARIKATIRRERHYKSSLSSKEE----KIIKIGDLSVDLHG 146
BSNT_00453___ 145 VSVLKNGEPLQLTSTEWQLLCLFASNSKKVFTKEQIYRSVWNEEYFDDQN 194
.||.|..|.:.||:.|:.:|.||.||..:|:||.|:|:|||.:||..|:|
RBAM_035010 147 FSVKKFNEKINLTAKEFNILKLFISNPSQVYTKSQLYKSVWEDEYHGDEN 196
BSNT_00453___ 195 IINVHMRRLREKIEDDPSSPQYIKTLWGIGYKLGEF 230
:||||:||||||||||||.|.|||||||||||||:|
RBAM_035010 197 VINVHIRRLREKIEDDPSHPMYIKTLWGIGYKLGDF 232
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.