Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05792 and RBAM_035100

See DNA alignment / Visit BSNT_05792 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:18
# Commandline: needle
#    -asequence pep-align/BSNT_05792___spsG.1.9828.seq
#    -bsequence pep-align/RBAM_035100___spsG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05792___spsG-RBAM_035100___spsG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05792___spsG-RBAM_035100___spsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05792___spsG
# 2: RBAM_035100___spsG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     181/339 (53.4%)
# Similarity:   243/339 (71.7%)
# Gaps:           5/339 ( 1.5%)
# Score: 969.0
# 
#
#=======================================

BSNT_05792___      1 MRVGIFADGGYEKGMGHVVRMKRLAEGLKQRCLITFYTNQESEAFLHEEH     50
                     ||:.||||||.:.||||.||||.||..:|..|.||||||:|:.::|..:.
RBAM_035100__      1 MRILIFADGGRDIGMGHAVRMKLLAGAIKNNCSITFYTNKEASSYLSSDQ     50

BSNT_05792___     51 WRVIVKPELQQHEFILREIKSKKLDLLLFDILGAPAELLKKIKTETDAKI    100
                     |.||:||:.:|.:||:|||..:..|||:||:|..|.:.|:::|..:.|:|
RBAM_035100__     51 WEVIIKPDKEQKKFIVREINRQAPDLLIFDLLDMPCDWLEEVKKHSSARI    100

BSNT_05792___    101 VLFEEKNGKSIQYSDAVINGIYGDIRSRVYVQGNTRIYEGPDYLILHPAF    150
                     ||||||....|...|||||||||.::||....|:..:||||:|:||||.|
RBAM_035100__    101 VLFEEKREHVIHLCDAVINGIYGGLKSRTVQMGSAAVYEGPEYMILHPGF    150

BSNT_05792___    151 QAAREDYTLKKDCRNILVALGGSDPKQLIFKVLAAADQVPDIKDKNMMFV    200
                     :.|::.|.|:|:||.|||:|||||||:|:|||:.|..::|||..|.::.|
RBAM_035100__    151 EKAKQLYQLRKECRTILVSLGGSDPKKLVFKVMEACRRIPDIHRKRVIIV    200

BSNT_05792___    201 MGSASPHQEAVRRRIEKKPQYKMIEQTNDMAGLMKQADAAIVAGGISLYE    250
                     ||.|:||.:.||..:.:.|..:|:.||||||.|:.:||.|:|:|||:|||
RBAM_035100__    201 MGGAAPHADDVRAHLTQMPYAEMVRQTNDMAALLSRADMAVVSGGITLYE    250

BSNT_05792___    251 AICIGVPCLVLSQVEHQTATAKTFAGQGAALDLGLGELVPDETLIYQMSR    300
                     .||.||||:|||||||||.||..||.:|||:.|||||.:..:.|...||.
RBAM_035100__    251 TICTGVPCIVLSQVEHQTETAGKFAARGAAVHLGLGEGISADVLARHMSD    300

BSNT_05792___    301 IMSSYPLRLSLHKGGRPLVDGKGIIRVTAILQDLYEQEI    339
                     :.:.||||..||:.|:|||||:||.|..|||.||     
RBAM_035100__    301 MAADYPLRTGLHQNGKPLVDGRGIKRAAAILYDL-----    334


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