Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05842 and RBAM_035450

See DNA alignment / Visit BSNT_05842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:21
# Commandline: needle
#    -asequence pep-align/BSNT_05842___galT.1.9828.seq
#    -bsequence pep-align/RBAM_035450___galT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05842___galT-RBAM_035450___galT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05842___galT-RBAM_035450___galT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05842___galT
# 2: RBAM_035450___galT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     358/513 (69.8%)
# Similarity:   422/513 (82.3%)
# Gaps:           0/513 ( 0.0%)
# Score: 1936.0
# 
#
#=======================================

BSNT_05842___      1 MSIIEHLEQLLEYGLERKLISIWDREYTRNRLYEALGITHPEPVSSTSIK     50
                     |:|..|:|:|:.|||:::|||..|.|||||||||||.|||||........
RBAM_035450__      1 MAIERHVERLIRYGLQKELISYLDIEYTRNRLYEALHITHPEVSEQKENV     50

BSNT_05842___     51 QSQSLPDLLAPIYKWAAETGRMEADTDTYRDLLSAKLMGCFVPAPSEVIR    100
                     .:.||.|||||||:|||||||:.|||||||||||||:||||.|.|||::|
RBAM_035450__     51 SAASLSDLLAPIYEWAAETGRIAADTDTYRDLLSAKIMGCFAPQPSEIVR    100

BSNT_05842___    101 KFEETKALYGPKQATKEFYQYSEDVYYIRTDRIAKNVHWTVPTEYGELEM    150
                     :||||||::||:||||.||::||||||||:|||.:||.||..|.||:|::
RBAM_035450__    101 RFEETKAVHGPEQATKAFYRFSEDVYYIRSDRIKRNVGWTAETAYGKLDI    150

BSNT_05842___    151 TINLSKPEKDPKAIAAAKEQEQTNYPMCLLCKENVGFEGSVNHPARQNHR    200
                     ||||||||||||||||||||.|::||.|:|||||||:||..:||||||.|
RBAM_035450__    151 TINLSKPEKDPKAIAAAKEQPQSDYPRCVLCKENVGYEGRPDHPARQNLR    200

BSNT_05842___    201 IIPVILEDEQWFLQFSPYVYYPEHCIVLKGEHEPMEISKKTFGRLLAFLG    250
                     :|||||.||||||||||||||.|||||||..||||:||||||.|||:|:.
RBAM_035450__    201 VIPVILGDEQWFLQFSPYVYYREHCIVLKDRHEPMKISKKTFDRLLSFVS    250

BSNT_05842___    251 QYPHYFIGSNADLPIVGGSILSHDHFQGGAHDFPMARAEAEDVYELNDYP    300
                     ||||||:||||||||||||||||||||||.::|||||||.|..|.|.|||
RBAM_035450__    251 QYPHYFLGSNADLPIVGGSILSHDHFQGGNYEFPMARAETESRYRLPDYP    300

BSNT_05842___    301 GVSLGLVKWPMSVLRLQGDEPGHVAEAADHIFRTWQTYSDEKAGIAAYTG    350
                     ...||:|||||||:|||.:....::.|||.|.|.|:.||||.|.:.|.:|
RBAM_035450__    301 KTVLGIVKWPMSVIRLQSESASELSGAADAILRAWRGYSDEAADLLACSG    350

BSNT_05842___    351 DTPHNTVTPIARRRGDLYELDIVLRNNRTDEEHPLGIFHPHQEVHHIKKE    400
                     :|||||:|||||||..|:|||:||||||..:|||||||||||||||:|||
RBAM_035450__    351 ETPHNTITPIARRRNGLFELDLVLRNNRASDEHPLGIFHPHQEVHHLKKE    400

BSNT_05842___    401 NIGLIEVMGLAILPGRLQEEMKETAAALCSADPKTALEQNPLTAKHSEWA    450
                     |||||||||||||||||::|||.||.||||.||:..|..:...:||.:||
RBAM_035450__    401 NIGLIEVMGLAILPGRLEQEMKYTAEALCSPDPEAVLTADLSASKHKDWA    450

BSNT_05842___    451 LRMMEKRTITKENADLVIKEELGHVFARILEHAGVFKQTAVGKQAFRRFI    500
                     |.::.||.:|||||:.::|||:||.||||||||||||||..|:.||||||
RBAM_035450__    451 LSVLHKRKVTKENAEQILKEEIGHAFARILEHAGVFKQTEEGRAAFRRFI    500

BSNT_05842___    501 DQLGAKPVKSLNR    513
                     ..|||.|.||...
RBAM_035450__    501 RHLGALPEKSPIP    513


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