Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05846 and RBAM_035490

See DNA alignment / Visit BSNT_05846 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05846.1.9828.seq
#    -bsequence pep-align/RBAM_035490.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05846-RBAM_035490.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05846-RBAM_035490.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05846
# 2: RBAM_035490
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 53
# Identity:      31/53 (58.5%)
# Similarity:    39/53 (73.6%)
# Gaps:           1/53 ( 1.9%)
# Score: 149.0
# 
#
#=======================================

BSNT_05846         1 MKTHVKKDLDKGWHMLIQEARSIGLGIHDVRQFLESETASRKKN-HKKTV     49
                     |||||.||:|:.|.:||||||.:||.|.|||:||.:|.|.:||. .|.|:
RBAM_035490        1 MKTHVMKDIDQDWQLLIQEARIMGLHIDDVRRFLNTEKAVKKKTPMKNTI     50

BSNT_05846        50 RQD     52
                     ||.
RBAM_035490       51 RQR     53


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.