Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05930 and RBAM_035990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:26
# Commandline: needle
# -asequence pep-align/BSNT_05930___cydC.1.9828.seq
# -bsequence pep-align/RBAM_035990___cydC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05930___cydC-RBAM_035990___cydC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05930___cydC-RBAM_035990___cydC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05930___cydC
# 2: RBAM_035990___cydC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity: 481/567 (84.8%)
# Similarity: 521/567 (91.9%)
# Gaps: 0/567 ( 0.0%)
# Score: 2457.0
#
#
#=======================================
BSNT_05930___ 1 MGKDLFRYKGMKRILTLITCLTLIQTAAIIMQAEWLSEALTGLFNGKGIT 50
||||||.||||||||.:||.||:|||||||:||||||:|:|||||||.|.
RBAM_035990__ 1 MGKDLFLYKGMKRILAIITGLTIIQTAAIILQAEWLSQAVTGLFNGKRIA 50
BSNT_05930___ 51 SLFPVISFFLIAFIARHGVTVARQKIVYQYAARTGADLRKSFLDQLFRLG 100
||:|||.|||:||:.||.||..||||||||||:|||||||.||:||||||
RBAM_035990__ 51 SLYPVIGFFLLAFLVRHAVTTVRQKIVYQYAAQTGADLRKRFLEQLFRLG 100
BSNT_05930___ 101 PRFAKKEGTGQMVTLAMEGISQFRRYLELFLPKMVSMAIVPAAVVIYVFF 150
||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_035990__ 101 PRFAKKEGTGRMVTLAMEGISQFRRYLELFLPKMVSMAIVPAAVVIYVFF 150
BSNT_05930___ 151 QDRTSAIILVAAMPILIIFMILLGLVAQRKADRQWKSYQRLSNHFVDSLR 200
||:|||:||:.|:||||:||||||||||:||||||||||.||||||||||
RBAM_035990__ 151 QDKTSALILILALPILIVFMILLGLVAQKKADRQWKSYQTLSNHFVDSLR 200
BSNT_05930___ 201 GLETLRFLGLSKSHSKNIFYVSERYRKATMSTLRVAFLSSFALDFFTMLS 250
|||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_035990__ 201 GLETLRFLGLSKSHSKNIFHVSERYRKATMSTLRVAFLSSFALDFFTMLS 250
BSNT_05930___ 251 VATVAVFLGLRLIDGDILLGPALTALILAPEYFLPVREVGNDYHATLNGQ 300
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_035990__ 251 VATVAVFLGLRLIDGQILLGPALTALILAPEYFLPVREVGNDYHATLNGQ 300
BSNT_05930___ 301 EAGKTIQEILSQPGFKEETPLQLEDWSDQDELKLSGVSVGRSVSDIHLSF 350
|||||||.||:|||||||.||:|:.|:|.|||:|:.:||..|:|:.||||
RBAM_035990__ 301 EAGKTIQAILAQPGFKEEKPLELDTWTDGDELQLTRLSVRESMSEFHLSF 350
BSNT_05930___ 351 KGKKKIGIIGASGAGKSTLIDILGGFLEPDGGMIEVNGTSRSHLQDGSWQ 400
||||||||||.||||||||||:|||||||..|.|:|||.||||||...||
RBAM_035990__ 351 KGKKKIGIIGESGAGKSTLIDVLGGFLEPASGEIKVNGESRSHLQSDGWQ 400
BSNT_05930___ 401 KNLLYIPQHPYIFDDTLGNNIRFYHPSASAEDTARAAAAAGLAELVDSLP 450
|.|||||||||||||||.||||||||.||.|:||:||.:|||:.|:..||
RBAM_035990__ 401 KQLLYIPQHPYIFDDTLLNNIRFYHPDASREETAQAARSAGLSGLIRDLP 450
BSNT_05930___ 451 EGLEGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHLDIETEY 500
.||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035990__ 451 GGLDGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHLDIETEY 500
BSNT_05930___ 501 EIKETMLDLFEDKLVFLATHRLHWMLDMDEIIVLDGGRVAEVGTHNELLE 550
||||||.||||:||||||||||||||:||||||||.|.|||:|||:||:.
RBAM_035990__ 501 EIKETMKDLFENKLVFLATHRLHWMLEMDEIIVLDDGAVAEIGTHDELMA 550
BSNT_05930___ 551 KNGVYTKLVKAQLGERA 567
|.|||.||||||||||.
RBAM_035990__ 551 KQGVYAKLVKAQLGERT 567
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