Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05932 and RBAM_036010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:26
# Commandline: needle
# -asequence pep-align/BSNT_05932___cydA.1.9828.seq
# -bsequence pep-align/RBAM_036010___cydA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05932___cydA-RBAM_036010___cydA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05932___cydA-RBAM_036010___cydA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05932___cydA
# 2: RBAM_036010___cydA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 415/468 (88.7%)
# Similarity: 439/468 (93.8%)
# Gaps: 0/468 ( 0.0%)
# Score: 2200.0
#
#
#=======================================
BSNT_05932___ 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKM 50
|||||||||||||||||||||||:|||||||||||||||:|||.|.||||
RBAM_036010__ 1 MSELVLARIQFASTTLFHFLFVPLSIGLVFMVALMETLYVVKKQETYLKM 50
BSNT_05932___ 51 AKFWGHLFLINFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEAL 100
||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_036010__ 51 AKFWGHLFLINFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAVEAL 100
BSNT_05932___ 101 LAFFMESIFIGLWIFGWDRLPKKIHALCIWLVSFGTIMSSFWILTANSFM 150
||||||||||||||||||||.||:|.||||||||||||||||||||||||
RBAM_036010__ 101 LAFFMESIFIGLWIFGWDRLSKKVHLLCIWLVSFGTIMSSFWILTANSFM 150
BSNT_05932___ 151 QEPVGFTIKNGRAEMNDFGALITNPQLWVEFPHVIFGALATGAFFIAGVS 200
||||||.||||||||||||||:||||||||||||||||||||||||||||
RBAM_036010__ 151 QEPVGFAIKNGRAEMNDFGALLTNPQLWVEFPHVIFGALATGAFFIAGVS 200
BSNT_05932___ 201 AFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLMESQPMKM 250
|||||||||||||.:||||:|||||.||:||..|||||||||||||||||
RBAM_036010__ 201 AFKLLKKKEVPFFHKSFKLSMIVGLIAGIGVAFSGHMQAEHLMESQPMKM 250
BSNT_05932___ 251 AASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGS 300
||||.||:||||||||||||.|||..||:::||.:|||||||||||||||
RBAM_036010__ 251 AASEALWDDSGDPAAWTAFANIDTNKEKNTSEISIPYALSYLAYQKFSGS 300
BSNT_05932___ 301 VKGMKTLQAEYEKIYGKGDYIPPVKTTFWSFRIMVGAGVVMILAALGGLW 350
||||||||.||||.||||||||||||||||||||.|||.:||.||:.|..
RBAM_036010__ 301 VKGMKTLQKEYEKTYGKGDYIPPVKTTFWSFRIMAGAGALMIFAAIAGFI 350
BSNT_05932___ 351 LNRRKKLENSKWYLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTT 400
|||||||..||||||.|||||:|||:||||||||||||||||||||.:||
RBAM_036010__ 351 LNRRKKLHTSKWYLRGMIALIAFPFIANSAGWIMTEIGRQPWTVMGQLTT 400
BSNT_05932___ 401 AQSVSPNVTAGSLLFSIIAFGVMYMILGALLVFLFIREIKKGAEHSDHHD 450
|||||||||.||||||||:|||||:||||||||||:|||||||:|.||.|
RBAM_036010__ 401 AQSVSPNVTTGSLLFSIISFGVMYLILGALLVFLFVREIKKGADHDDHKD 450
BSNT_05932___ 451 VPVSTDPFSQEVYHGISS 468
|||||||||||||||::|
RBAM_036010__ 451 VPVSTDPFSQEVYHGVTS 468
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