Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05993 and RBAM_036240

See DNA alignment / Visit BSNT_05993 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_05993.1.9828.seq
#    -bsequence pep-align/RBAM_036240.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05993-RBAM_036240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05993-RBAM_036240.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05993
# 2: RBAM_036240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      37/116 (31.9%)
# Similarity:    57/116 (49.1%)
# Gaps:          27/116 (23.3%)
# Score: 145.5
# 
#
#=======================================

BSNT_05993         1 ------MFQHIKKWRFYRETD-HVLGAIYTIELAAVYHSRTIV--VIFKD     41
                           :.|.:.::|.:||.: .|:..:::.|    |..:.|.  :|.||
RBAM_036240        1 MKKNKWLIQELLEFRLFREREISVIELVFSFE----YEHQLICLRLICKD     46

BSNT_05993        42 VSVVTIRDMETLTDLSDGLLHIETQPQG----MYLVEEWEEQTFRFCCRQ     87
                     ||.|.|::||:.. ...|::.|:....|    .:||||||.|||||.|||
RBAM_036240       47 VSSVQIKEMESHA-AGSGIVTIDPAADGDEGQHFLVEEWENQTFRFYCRQ     95

BSNT_05993        88 YEVMEVE---------     94
                     ||..|.:         
RBAM_036240       96 YEAAEKKEAQNGTAQT    111


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