Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06069 and RBAM_036530

See DNA alignment / Visit BSNT_06069 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06069___yxeE.1.9828.seq
#    -bsequence pep-align/RBAM_036530___yxeE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06069___yxeE-RBAM_036530___yxeE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06069___yxeE-RBAM_036530___yxeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06069___yxeE
# 2: RBAM_036530___yxeE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      82/128 (64.1%)
# Similarity:    97/128 (75.8%)
# Gaps:           7/128 ( 5.5%)
# Score: 399.5
# 
#
#=======================================

BSNT_06069___      1 MNPYQYYSP--QLPQQEPY-YSHYEYNPYPQQDVY---DPYQMDRQP-AL     43
                     |||||||:|  ..|||:.| .:..||.||.||:.|   .|...:||| .|
RBAM_036530__      1 MNPYQYYTPPAYFPQQQEYEVNRVEYEPYQQQESYYYAPPQSEERQPTGL     50

BSNT_06069___     44 ERRIAALERQNEQQSRELTRLTNEDRRQNREIARIAEQVNQLSQAVERHT     93
                     |||:|.|||||.:|:||||||:.||:||||||.|:.||:.:|||::|.||
RBAM_036530__     51 ERRVAQLERQNAEQTRELTRLSQEDQRQNREITRMNEQIRRLSQSIEIHT    100

BSNT_06069___     94 RRLNRLNQRLRTVENRLNIPFTAGEGGF    121
                     |||||||||||.|||||||||.|.||||
RBAM_036530__    101 RRLNRLNQRLRAVENRLNIPFHATEGGF    128


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.