Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04808 and RBAM_037010

See DNA alignment / Visit BSNT_04808 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_04808___pucE.1.9828.seq
#    -bsequence pep-align/RBAM_037010.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04808___pucE-RBAM_037010.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04808___pucE-RBAM_037010.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04808___pucE
# 2: RBAM_037010
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:      60/173 (34.7%)
# Similarity:    85/173 (49.1%)
# Gaps:          21/173 (12.1%)
# Score: 284.0
# 
#
#=======================================

BSNT_04808___      1 MDVKEAGPFPVKKEQFRMTVNGQEWEVAAVPTTHLSDLLRKEFQLTGTKV     50
                                ..:...:.|||:|.::...|...|...||....|||.|.
RBAM_037010        1 -----------MSDPITLKVNGEERQITVRPADTLLFALRLRLGLTGAKP     39

BSNT_04808___     51 SCGIGRCGACSILIDGKLANACMTMAYQVDGHSITTIEGVQQEELDICQT    100
                     .|..|.||||::|.||....:|:.:|.:.:|..||||||:....:   |.
RBAM_037010       40 GCLNGDCGACTVLTDGVPMKSCLMLAAEGEGKDITTIEGLINTPI---QK     86

BSNT_04808___    101 AFLEEGGFQCGYCTPGMIIALKALFRETPQPSDEDIEEGLAGNLCRCTGY    150
                     ||:|:..|||||||||.::...||....|..||:.|...|..|:||||||
RBAM_037010       87 AFIEKFAFQCGYCTPGFLMNCHALVNTEPNASDDTINNWLESNICRCTGY    136

BSNT_04808___    151 GGIMRSACRIRRELNGGRRESGF    173
                     ..|..:   ::..|:.|:.    
RBAM_037010      137 REIEEA---VKSVLHTGKP----    152


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