Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06261 and RBAM_037310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:42
# Commandline: needle
# -asequence pep-align/BSNT_06261.1.9828.seq
# -bsequence pep-align/RBAM_037310.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06261-RBAM_037310.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06261-RBAM_037310.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06261
# 2: RBAM_037310
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity: 81/408 (19.9%)
# Similarity: 159/408 (39.0%)
# Gaps: 93/408 (22.8%)
# Score: 209.0
#
#
#=======================================
BSNT_06261 1 ------------------------------------ME---HRYSLNTSI 11
|. .|:....|:
RBAM_037310 1 MKNLILIQKQQAWCIVASKAVTPLIGELLSFRGYVMMSTDCKRWKFKDSV 50
BSNT_06261 12 RCDLLNDGLVVMVADNEPVLITEGIDEYLEFLSIFRFPVSKEIGLEQLNN 61
:.......:::.......:..|..|.|.:|.|: ||.|:...
RBAM_037310 51 QVLTYTAHIIIQYRKAIKLAHTSEIKEAVERLT---------IGCEKQEL 91
BSNT_06261 62 AFYVNNSNYNKIFEFSIE-NNIIKTYDDNVDSIKTLSDYQLQKFDRQIKS 110
:..:.....|:.|:..:: :.:|:.:.:..:. .:::.||..|::..::
RBAM_037310 92 SDLLGEEAGNQFFDALMKLDALIEPWQNGREG--RITEKQLYHFEKYNQN 139
BSNT_06261 111 FNTLKGLNYSDAHGMQCKLVNSKIIIIGVGGIGSYLSLSLASMGVEDMVI 160
.|.: |.:|..|:..|:|:||:|:.:..:|.:.|::..::
RBAM_037310 140 PNLI-----------QKRLDGSRAAIVGLGGVGTIILQNLLAAGLQHFIL 178
BSNT_06261 161 IDKDEIELSNTSRQILYSEDDIGKSKVQVAARKLKKYNKNLKLHTYEKFI 210
||.|.:.:.|.:||.:|::..:||.|:......:...|.|.....|.|.|
RBAM_037310 179 IDFDAVSVHNLNRQFVYNKSSVGKLKISECRDYIAGINPNADAALYHKEI 228
BSNT_06261 211 TTIDDLQIIRDHHDADLIVLCADTPRGEIQYMVDQISQDLKIPWM----- 255
|...||::: |.::.|:::..||.|. .|...|.:..::..|.:|
RBAM_037310 229 TQPQDLRVL-DPYEIDIVINAADKPH-NISEWVYRYCKERNIAFMTGGVG 276
BSNT_06261 256 -FFGPYNHSKVVIGPLIIPGKTKS---YSDIFPKLMVKNDCRTEIINENF 301
|.|.: |||:.|...:| |....|..:: :| ..:..
RBAM_037310 277 SFSGQW-------GPLLTPESYQSGVTYEKNMPAGLL--NC----YPDEP 313
BSNT_06261 302 IASIIDPFNGIAAKMASIEILKYITGYHMNSIEQKRILLDTDDWIIEKRL 351
|...:...|||.:...|.:|:.|:.|....|: ..||.||.|...|.:..
RBAM_037310 314 IKGSLGATNGIISSFMSHDIITYLAGGSPKSL-NTRIGLDFDGLHITETK 362
BSNT_06261 352 LD------ 353
|.
RBAM_037310 363 LSQKESAL 370
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