Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06246 and RBAM_037790

See DNA alignment / Visit BSNT_06246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence pep-align/BSNT_06246___yybA.1.9828.seq
#    -bsequence pep-align/RBAM_037790___yybA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06246___yybA-RBAM_037790___yybA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06246___yybA-RBAM_037790___yybA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06246___yybA
# 2: RBAM_037790___yybA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     132/150 (88.0%)
# Similarity:   143/150 (95.3%)
# Gaps:           0/150 ( 0.0%)
# Score: 679.0
# 
#
#=======================================

BSNT_06246___      1 MNDILREIGMIARALDSISNIEFKDLDLTRGQYLYLVRIYENPGIIQEKL     50
                     |.||||||||||||||||||||||:||||:|||||||||.||||:||||:
RBAM_037790__      1 MTDILREIGMIARALDSISNIEFKELDLTKGQYLYLVRICENPGVIQEKV     50

BSNT_06246___     51 AEMIKVDRTTAARAIKKLEMQGFIQKLPDEQNKKIKKLFPTEKGKKVYPL    100
                     |||||||||||||||||||:||||:|.||:||||||||||||||:|||||
RBAM_037790__     51 AEMIKVDRTTAARAIKKLEIQGFIEKRPDDQNKKIKKLFPTEKGRKVYPL    100

BSNT_06246___    101 LRREGEHSTEVALSGFTSEEKETISALLHRVRKNIERDWEYVKKGNKRDY    150
                     |:||||||.|||||||||||||||.:||.|||||||.|||:|||||||||
RBAM_037790__    101 LQREGEHSAEVALSGFTSEEKETIFSLLQRVRKNIEHDWEFVKKGNKRDY    150


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