Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06265 and RBAM_037940

See DNA alignment / Visit BSNT_06265 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:42
# Commandline: needle
#    -asequence pep-align/BSNT_06265.1.9828.seq
#    -bsequence pep-align/RBAM_037940___ccpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06265-RBAM_037940___ccpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06265-RBAM_037940___ccpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06265
# 2: RBAM_037940___ccpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     112/312 (35.9%)
# Similarity:   131/312 (42.0%)
# Gaps:         165/312 (52.9%)
# Score: 556.0
# 
#
#=======================================

BSNT_06265         1 MANIKEIARLANVSVSTVSRVLNHHPYVSEEKRKLVQQVMKDLDYTPNRT     50
                     ||||||||:||||||:|||||||.|||||||||:||.||||:||||||||
RBAM_037940__      1 MANIKEIAKLANVSVATVSRVLNRHPYVSEEKRRLVNQVMKELDYTPNRT     50

BSNT_06265        51 AIDLIRGKTHTVGVILPYSDHPCFDKIVNGITKAAFQNEYATTLLPTNYN    100
                     |||||||||:|:|||||||||||||||||||||.||.::|.||||||||:
RBAM_037940__     51 AIDLIRGKTNTIGVILPYSDHPCFDKIVNGITKEAFAHDYVTTLLPTNYD    100

BSNT_06265       101 PAIEIKYLELLRMKKIDGLIITSRAQLGESSRNHIKQ------TFMKH--    142
                     ||||:.|.|||:||||||||:||||...|::..:::.      .:.:|  
RBAM_037940__    101 PAIEMTYFELLKMKKIDGLIVTSRANEWETAVPYLEYGPIVACEYTQHQE    150

BSNT_06265       143 --CT-----AAY--------------------------------------    147
                       |.     |||                                      
RBAM_037940__    151 IPCAYNDRQAAYRESFLYLKNRGHQDVAFTCVREAEKSPSTADKVTAYKA    200

BSNT_06265       147 --------------------------------------------------    147
                                                                       
RBAM_037940__    201 VFGSLDETRILVGCHDMDDGKRAGEHFWGFDKAPTAIYAHSDDVAAGLYQ    250

BSNT_06265       147 --------------------------------------------------    147
                                                                       
RBAM_037940__    251 FAKEQKWDAEIIGEGNLSVSRALNIPSLELHLERVGKEAFLLFFHEETAK    300

BSNT_06265       147 ------------    147
                                 
RBAM_037940__    301 KQIMHQFQRKKS    312


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